Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0450
(764 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 32 0.44
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 0.77
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 30 1.8
SB_10132| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09) 29 4.1
SB_20793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_6008| Best HMM Match : CPSase_L_D2 (HMM E-Value=0) 29 5.4
SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 28 7.2
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 28 7.2
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_6981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06) 28 7.2
SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 9.5
SB_55169| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_52890| Best HMM Match : PH (HMM E-Value=1e-06) 28 9.5
SB_47250| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08) 28 9.5
SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43) 28 9.5
SB_38780| Best HMM Match : Astacin (HMM E-Value=0) 28 9.5
SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06) 28 9.5
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 28 9.5
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 28 9.5
SB_16130| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_14578| Best HMM Match : Gal_Lectin (HMM E-Value=0.72) 28 9.5
SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_12469| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_8735| Best HMM Match : RVT_1 (HMM E-Value=2.00386e-43) 28 9.5
SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_5933| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_2170| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 28 9.5
SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93) 28 9.5
SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_43612| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_42594| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_40440| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_39589| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_37327| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 9.5
SB_37146| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_36046| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 9.5
SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 9.5
SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_27212| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 28 9.5
SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52) 28 9.5
SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 9.5
SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGL-EDAPRSLYPSVASIRGLSPPPG 207
P+ G +PS G P SASN F P S + + + P Y +++++ L P
Sbjct: 318 PSGGIQPSSSQGGIFGSPLSASNSFGPMISSSSTAPISSNPPEDKYSALSALDTLFGPSS 377
Query: 206 VAGST 192
AG T
Sbjct: 378 NAGGT 382
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -1
Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAP--RSLYPSVASIRGLSPPP 210
P+ G P P PS PPP + PP +R T P RS RG PPP
Sbjct: 291 PSRGAAPPP-PSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPP 349
Query: 209 GV 204
+
Sbjct: 350 SM 351
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 365 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 210
P P+PS PPP A+++ P L ST ++ P P + G PPP
Sbjct: 340 PPPVPSATSAPPPWATSNSGPKPL--MSTPVQRPPGMRPPGAGNGPGGPPPP 389
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 394 AFICPLLDIGLPQCLPHNAVLRLPHPT 314
AFI PL+ L +PH ++ PHPT
Sbjct: 372 AFILPLIQASLLPLVPHTSIPPTPHPT 398
>SB_10132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 388 ICPLLDIGLPQCLPHNAVLRLPHPTTSRR-AH*VVSPPGWRTPHAPCTHPWPPFEDFPPH 212
+ PLLD LP PH ++ R P+P + P W TP+ P P+ P+ + PH
Sbjct: 23 LTPLLDTPLPYWTPH-SLTRHPYPLLDTHIPYWTAHIPYW-TPYLPYWTPYLPY--WTPH 78
>SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)
Length = 712
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -2
Query: 349 PHNAVLRLPHPTTSRRAH*VVSPPGWRTPHAPCTHPWPPFEDFPPHLASLARQMYIVL 176
PH+A+ + PH + H V+ P PH+ P D PPH ++L + ++ VL
Sbjct: 86 PHSALDKPPHSALDKPPHSVLDKP----PHSALDKPPHSALDKPPH-SALDKPLHSVL 138
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2
Query: 349 PHNAVLRLPHPTTSRRAH*VVSPPGWRTPHAPCTHPWPPFEDFPPHLAS 203
PH+A+ + PH + H V+ P PH P D PPH AS
Sbjct: 278 PHSALDKPPHSALDKPPHSVLDKP----PHLALDKPPHSALDKPPHSAS 322
>SB_20793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Frame = +2
Query: 227 LEWRPRMGTRSVGRPPTRWTDDLVRTAGSRWMR-------KAEDRIMWKALGKA 367
L W P G R GRP T W + R G R K DR WK KA
Sbjct: 194 LTWTPE-GRRKQGRPKTTWRRTVERERGEAGWRNWDEVRSKEADREKWKTTVKA 246
>SB_6008| Best HMM Match : CPSase_L_D2 (HMM E-Value=0)
Length = 866
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +1
Query: 184 YTSVEPATPGGGESPRMEATDGYKERGASSNPVD*RLSAHGG-KSLDAEGGGPHYVEGIG 360
Y +E GG+ DGY N D + HGG D +G G G G
Sbjct: 707 YAEIEVTNDSGGDDDNDGEFDGYGNDNNDYNDGDGEYNYHGGDDDGDGDGDGDGGSNGGG 766
Query: 361 EG 366
+G
Sbjct: 767 DG 768
>SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Frame = +2
Query: 203 RRQVGGKVLEWRPRMGTRSVGRPPTRWTDDLVRTAGSRWM------RKAEDRIMWK 352
+R++ L W P G R GRP T W ++ + KA DR WK
Sbjct: 3 QRRIPKVALRWTPT-GRRKPGRPKTTWRRTILSELSKHQLTLAEAQHKARDRRKWK 57
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 349 PHNAVLRLPHPTTSRRAH*VVSPPGWRTPHAP-CTHPWPPFEDFP 218
PH+ + PH T+ R H ++P R+PH P P P P
Sbjct: 57 PHDPITPRPHRPTAPRPHDPIAPRP-RSPHGPVAPRPHRPISPRP 100
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 204 DARWGGKSSNGGHGW 248
D WGG GGHGW
Sbjct: 577 DGGWGGHGGFGGHGW 591
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = -1
Query: 395 SLYLPTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSP 216
+L P A R P P GPP PP + Q G P +L P +RG+ P
Sbjct: 417 NLSTPAANMRLPPPPQH-TGPPQPR----PPHGMP-QGGGPPQLPPNLPPPPGGMRGMPP 470
Query: 215 PP 210
PP
Sbjct: 471 PP 472
>SB_6981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Frame = +2
Query: 203 RRQVGGKVLEWRPRMGTRSVGRPPTRWTDDLVRTAGSRWM------RKAEDRIMWK 352
+R++ L W P G R GRP T W ++ + KA DR WK
Sbjct: 3 QRRIPKVALRWTPT-GRRKPGRPKTTWRRTILSELSKHQLTLAEAQHKARDRRKWK 57
>SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06)
Length = 659
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 389 YLPTAGHRPSPMPST*CGPPPSASNDF 309
Y PT P+P S PPP SNDF
Sbjct: 88 YAPTEDFLPAPRVSDPPPPPPMISNDF 114
>SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 370
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 263 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 304
>SB_55169| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 137
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 28 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 69
>SB_52890| Best HMM Match : PH (HMM E-Value=1e-06)
Length = 449
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 149 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 190
>SB_47250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 28 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 69
>SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08)
Length = 573
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 28 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 69
>SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43)
Length = 677
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 589 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 630
>SB_38780| Best HMM Match : Astacin (HMM E-Value=0)
Length = 1153
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 555 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 596
>SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06)
Length = 530
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 421 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 462
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 869 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 910
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -1
Query: 374 GHRPSPMPST*CGPPPSAS---NDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGV 204
G P+ + + PPP+A+ +PP + AP P VA+ G P PG
Sbjct: 700 GAPPASVAAPKAYPPPAAAAAPQGYPPSSAPTGYQARGPAPPGAKPRVAAPYGAVPRPGA 759
Query: 203 AGST 192
+T
Sbjct: 760 PAAT 763
>SB_16130| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 137
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 28 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 69
>SB_14578| Best HMM Match : Gal_Lectin (HMM E-Value=0.72)
Length = 502
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 358 QCLPHNAVLRLPHPTTSRRAH*VVSPPGWRTPHAPCT 248
+C V+ + T R A V PPG R P APCT
Sbjct: 31 KCASIYNVIEIGEATFGREAAMVCLPPG-RAPEAPCT 66
>SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 179 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 220
>SB_12469| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 127
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 18 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 59
>SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 192
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 83 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 124
>SB_8735| Best HMM Match : RVT_1 (HMM E-Value=2.00386e-43)
Length = 661
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 552 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 593
>SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 318
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 209 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 250
>SB_5933| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 65 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 106
>SB_2170| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 65 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 106
>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
Length = 754
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 117 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 158
>SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93)
Length = 1104
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 801 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 842
>SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 226
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 117 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 158
>SB_43612| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 65 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 106
>SB_42893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 698 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 739
>SB_42594| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 186
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 77 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 118
>SB_40440| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 137
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 28 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 69
>SB_39589| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 65 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 106
>SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 233 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 274
>SB_37327| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 168
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 5 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 46
>SB_37146| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 65 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 106
>SB_36046| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 65 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 106
>SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 198 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 239
>SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 406
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 117 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 158
>SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 233 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 274
>SB_27212| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 256
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 147 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 188
>SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 416
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 307 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 348
>SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52)
Length = 380
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 24 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 65
>SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 348
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 250 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 291
>SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 248 GTRSVGRPPTRWTDDLVR---TAG---SRWMRKAEDRIMWKA 355
G+R VGRP R+ D R G W + AEDR W++
Sbjct: 117 GSRPVGRPKLRFKDSCKRDMLAIGLDVDNWEKLAEDRSRWRS 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,804,249
Number of Sequences: 59808
Number of extensions: 489332
Number of successful extensions: 1601
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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