Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0450
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    26   1.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.9  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.8  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = +2

Query: 167 QVCKDNIHLSSQRRQVGGKVLEWRPRMGTR 256
           Q+ KD +  S++  ++GG+++ W P + +R
Sbjct: 350 QMYKDLLQFSARHLKLGGRLVCWFPMLSSR 379


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 386 LPTAGHRPSPMPST*CGPPPS 324
           LP A   P+P P    GPPPS
Sbjct: 576 LPNAQPPPAPPPPPPMGPPPS 596


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
 Frame = -1

Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIR-GLSPPP 210
           P   H P   PS    PP S S         R      +  +  +P   +IR  +SP P
Sbjct: 107 PHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHPQSPAIREPISPGP 165


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
 Frame = -1

Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIR-GLSPPP 210
           P   H P   PS    PP S S         R      +  +  +P   +IR  +SP P
Sbjct: 107 PHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHPQSPAIREPISPGP 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,266
Number of Sequences: 2352
Number of extensions: 15968
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)