Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0449
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...   308   2e-84
AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...    64   1e-10
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...    64   1e-10
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    44   9e-05
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...    44   1e-04
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    40   0.002
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    32   0.54 
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam ...    29   2.9  
Z70684-5|CAA94600.1|  233|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z70684-3|CAA94598.1|  233|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   8.8  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   8.8  

>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score =  308 bits (757), Expect = 2e-84
 Identities = 151/193 (78%), Positives = 162/193 (83%)
 Frame = +3

Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
           DVQF++NLPPILN LEV  RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G P
Sbjct: 81  DVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDP 140

Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
           I+IPVG ETLGRI+NVIGEPIDERGPI +   AAIHAEAPEFV+MSV+QEILVTGIKVVD
Sbjct: 141 IKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVD 200

Query: 573 LLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 752
           LLAPYA               TVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI
Sbjct: 201 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 260

Query: 753 ESGVISLKDKTSK 791
           E GVI LK K SK
Sbjct: 261 EGGVIDLKGKNSK 273


>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 30/97 (30%), Positives = 53/97 (54%)
 Frame = +3

Query: 294 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 473
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR+++ +G PID +GPI
Sbjct: 63  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122

Query: 474 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 584
              + + +  +AP  +     +E +VTG+K VD L P
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 159


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 30/97 (30%), Positives = 53/97 (54%)
 Frame = +3

Query: 294 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 473
           +A +L  + V  +     + +  G  V  +G+ + +PVG   LGR+++ +G PID +GPI
Sbjct: 90  MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149

Query: 474 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 584
              + + +  +AP  +     +E +VTG+K VD L P
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 186


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
 Frame = +3

Query: 306 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 482
           + +N       +GT G+     + + +G  +R PV  + LGRI N  G+PID+  P+  +
Sbjct: 71  ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130

Query: 483 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 578
               I+ +          +E++ TGI  +D++
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVM 162


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/49 (38%), Positives = 29/49 (59%)
 Frame = +3

Query: 438 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 584
           V+G PID +GPI   + + +  +AP  +     +E +VTG+K VD L P
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 151


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = +3

Query: 381 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 560
           +G   R PV  + LGRI N  G+PID+  P+  +    I+ +     +    +E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168

Query: 561 KVVDLL 578
             +D++
Sbjct: 169 SAIDVM 174


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 345 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 461
           T G+  G PVL +G P+ + +G   +G I + I  P+ +
Sbjct: 59  TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
 Frame = -2

Query: 565 TFIPVTRISCCTDMSTNSGASA*IAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTG 401
           TF PVT +S  +  +T +  +       +    P + +  +P T+  M P     + P  
Sbjct: 468 TFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVP 527

Query: 400 IRIGEPESSTGCPRTKPSVPS 338
              G P + T  P TKP+VPS
Sbjct: 528 TTTGSPTTQTTAPVTKPTVPS 548


>U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam
           protein 3 protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 339 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 515
           D  +G + G+P+ +D G  ++ P G E + ++ N  GEP+DE         A I +   E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209

Query: 516 FVDMSV 533
             +++V
Sbjct: 210 HAELTV 215


>Z70684-5|CAA94600.1|  233|Caenorhabditis elegans Hypothetical
           protein F28D1.5 protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 626 CGQNCIDYGTDQQCCQSPW 682
           C   C+ Y TDQ+CC+  +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186


>Z70684-3|CAA94598.1|  233|Caenorhabditis elegans Hypothetical
           protein F28D1.3 protein.
          Length = 233

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 626 CGQNCIDYGTDQQCCQSPW 682
           C   C+ Y TDQ+CC+  +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = -2

Query: 526 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 347
           + T  G +A  +A     M  RS    P+T M  P  +         P  S+  PR    
Sbjct: 9   LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68

Query: 346 VPSMAMVRTVFSP 308
            P+ A  +T   P
Sbjct: 69  TPTAAPPKTCAPP 81


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = -2

Query: 526 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 347
           + T  G +A  +A     M  RS    P+T M  P  +         P  S+  PR    
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197

Query: 346 VPSMAMVRTVFSP 308
            P+ A  +T   P
Sbjct: 198 TPTAAPPKTCAPP 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,585,935
Number of Sequences: 27780
Number of extensions: 405006
Number of successful extensions: 1137
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)