Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0447
(574 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9) 68 6e-12
SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8) 68 6e-12
SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9) 68 6e-12
SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5) 68 6e-12
SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 8e-12
SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7) 66 3e-11
SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5) 66 3e-11
SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_42346| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_36138| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_15035| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_25175| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_49084| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_34898| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5) 33 0.13
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 33 0.17
SB_45983| Best HMM Match : HLH (HMM E-Value=1.3) 31 0.51
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 30 1.2
SB_6379| Best HMM Match : Proteasome (HMM E-Value=0) 29 2.0
SB_52000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_9945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19) 27 8.2
SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRS-GVNLRNSNE 438
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE KS R G+ L+ +
Sbjct: 725 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELKSARQRRLGLGLKGGGK 781
>SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 148
Score = 67.7 bits (158), Expect = 6e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 62 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 112
>SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 67.7 bits (158), Expect = 6e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 8 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 58
>SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8)
Length = 148
Score = 67.7 bits (158), Expect = 6e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 62 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 112
>SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 147
Score = 67.7 bits (158), Expect = 6e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 61 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 111
>SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5)
Length = 206
Score = 67.7 bits (158), Expect = 6e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 120 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 170
>SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 67.7 bits (158), Expect = 6e-12
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 19 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 69
>SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +1
Query: 271 CLRVQP*AGGKLHLRLNMTARPIANKYREGKLKRTLKREFK 393
CL +QP GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 36 CLGMQPKMGGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 76
>SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7)
Length = 187
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Frame = -3
Query: 374 VLFNFPSRYLFAIGLAVIFSLRWSLPPA*GCTLKQPDS----KERP 249
VLF FPSRYLFAIGL IFS RWSLPP GC KQPDS +ERP
Sbjct: 89 VLFIFPSRYLFAIGLVPIFSFRWSLPPILGCIPKQPDSSKAHRERP 134
>SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 156
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Frame = -3
Query: 374 VLFNFPSRYLFAIGLAVIFSLRWSLPPA*GCTLKQPDS----KERP 249
VLF FPSRYLFAIGL IFS RWSLPP GC KQPDS +ERP
Sbjct: 58 VLFIFPSRYLFAIGLVPIFSFRWSLPPILGCIPKQPDSSKAHRERP 103
>SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 44
>SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 44
>SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFKST*NRSGVNLRNSN 435
GGKLHL+LN+ RPIANKYREGK+K TLKRE K RS + R+SN
Sbjct: 2 GGKLHLKLNIGKRPIANKYREGKMKSTLKRELK----RSRLPGRSSN 44
>SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 393
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_42346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 393
GGKLHL+LN+ RPIANKYREGK+K TLKRE K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKRELK 34
>SB_36138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 393
GGKLHL+LN+ RPIANKYREGK+K TLK+ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKKRVK 34
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 357 GKVEKNFEERVQEYVKPFRGKP 422
GK++ ++RV++YVKP +GKP
Sbjct: 23 GKMKSTLKKRVKKYVKPLKGKP 44
>SB_15035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 393
GGKLHL+LN+ RPIANKYREGK+K TLK+ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLKKRVK 34
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 357 GKVEKNFEERVQEYVKPFRGK 419
GK++ ++RV++YVKP +GK
Sbjct: 23 GKMKSTLKKRVKKYVKPLKGK 43
>SB_25175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 393
GGKLHL+LN+ RPIANKYREGK+K TL++ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKMKSTLEKRVK 34
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 357 GKVEKNFEERVQEYVKPFRGK 419
GK++ E+RV++YVKP +GK
Sbjct: 23 GKMKSTLEKRVKKYVKPLKGK 43
>SB_49084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTL 378
GGKLHL+LN+ RPIANKYREG++K TL
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGQMKSTL 29
>SB_34898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +1
Query: 295 GGKLHLRLNMTARPIANKYREGKLKRTLKREFK 393
GGKLHL+LN+ RPIANKYREGK ++ ++ K
Sbjct: 2 GGKLHLKLNIGTRPIANKYREGKDEKHFEKRVK 34
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 357 GKVEKNFEERVQEYVKPFRGKPAKLE*TNGEIH 455
GK EK+FE+RV++YVK +GK L IH
Sbjct: 23 GKDEKHFEKRVKKYVKTLKGKRMGLAMRRARIH 55
>SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 347 LFAIGLAVIFSLRWSLPPA*GCTLKQPDSKERPSRR 240
+ I + ++ + RWSLPP GC KQPDS + +R
Sbjct: 23 IIIIIIILLHTRRWSLPPILGCIPKQPDSSKAHRKR 58
>SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 33.9 bits (74), Expect = 0.095
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 316 ALDGVYHPLRAALSSNPTLRS-VPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPP 140
ALDG YHP AA +NPT R + RR G L + P +NLD EK +P
Sbjct: 58 ALDGFYHPFWAAFPNNPTRRKHIVNGRDRRRRGCHPL-RRAVP--SNLDDLGSAEKGDPL 114
Query: 139 E 137
E
Sbjct: 115 E 115
>SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 139
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = -3
Query: 311 RWSLPPA*GCTLKQPDS----KERP 249
RWSLPP GC KQPDS +ERP
Sbjct: 62 RWSLPPILGCIPKQPDSSKAHRERP 86
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 316 ALDGVYHPLRAALSSNPTLR 257
ALDGVYHP AA +NPT R
Sbjct: 58 ALDGVYHPFWAAFPNNPTRR 77
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 316 ALDGVYHPLRAALSSNPTLR 257
ALDGVYHP AA +NPT R
Sbjct: 344 ALDGVYHPFWAAFPNNPTRR 363
>SB_45983| Best HMM Match : HLH (HMM E-Value=1.3)
Length = 68
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1
Query: 313 LDGVYHPLRAALSSNPTLR 257
LDGVYHP AA +NPT R
Sbjct: 2 LDGVYHPFWAAFPNNPTRR 20
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -2
Query: 336 RSRGHI*P*MEFTTRLGLHSQATRL*GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVAT 157
RSR P RL H+ + L + P P T + + + T +G++++
Sbjct: 148 RSRKRPAPITTTNHRLNCHTNSVIL-SSRKRPAPITTTPITTTITNHRLNCHTNSGILSS 206
Query: 156 RKRNLPNTTSPV 121
RKR P TT+P+
Sbjct: 207 RKRPAPITTTPI 218
>SB_6379| Best HMM Match : Proteasome (HMM E-Value=0)
Length = 909
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1
Query: 346 CSLSVSRSYLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTAPFKTNL 176
C L S D + + +R+A ++ P LR P AA L R+G G T P + +L
Sbjct: 765 CKLFPSAPLGVADPLPYTIRSAGATQPGLRLRPYAADLARHGEGA--ALTEPLEVHL 819
>SB_52000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +3
Query: 363 VEKNFEERVQEYVKPFRGK 419
++ +FE+RV++YVKP +GK
Sbjct: 1 MKSHFEKRVKKYVKPLKGK 19
>SB_9945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 375 FEERVQEYVKPFRGK 419
FE+RV++YVKP +GK
Sbjct: 5 FEKRVKKYVKPLKGK 19
>SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19)
Length = 1828
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 187 KTNLDRSRRDEKAEPPEHHISRYRLKQRDSV-LGYIPVRSPLLRKSWLVSFPP 32
KT S + P +RYR++ RDSV ++ R+P S L++F P
Sbjct: 364 KTANATSSATNTTDLPRRRGTRYRIRARDSVDKSFVKFRNPNPSFSGLLTFEP 416
>SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 309 MEFTTRLGLHSQAT 268
MEFTT GLHSQ T
Sbjct: 1 MEFTTHFGLHSQTT 14
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,372,562
Number of Sequences: 59808
Number of extensions: 337922
Number of successful extensions: 969
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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