Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0446
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   1.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/62 (20%), Positives = 28/62 (45%)
 Frame = +3

Query: 159 QTKLLLG*ETNKKKQLSHFFHKNNRVFFVWQH*IIHDSFKSST*RSFLNQYSKCTFKI*I 338
           +T   L  + +K +   H +  NN ++   +   I++S + S  + +LN +      +  
Sbjct: 20  KTNPFLASDCDKNQNTEHNYTHNNEMYHSVKEEPIYESCRFSINQPYLNHFDNSVTPMVN 79

Query: 339 HD 344
           HD
Sbjct: 80  HD 81


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 184 KLTKKNNFLIFSTKIIVFFSYGNIRL 261
           KLT + + +I  TKI   FS G +++
Sbjct: 85  KLTNRESSIIDKTKISFNFSQGPVKI 110


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +3

Query: 123 FLTLQYAVKFYSQ 161
           FL++ YAVKF+++
Sbjct: 393 FLSVDYAVKFWTK 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,111
Number of Sequences: 336
Number of extensions: 2704
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)