Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0445
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.37 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.37 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.37 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.37 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 316 LSLNTWVYDLEKYIYDNNIAPIIKKNGKPVPNYDEVRY 429
           +SL  W    E YI  ++  P IKK GK   N ++ RY
Sbjct: 263 VSLGWW----ENYISRHSPIPFIKKLGKIKENLEQSRY 296


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 316 LSLNTWVYDLEKYIYDNNIAPIIKKNGKPVPNYDEVRY 429
           +SL  W    E YI  ++  P IKK GK   N ++ RY
Sbjct: 263 VSLGWW----ENYISRHSPIPFIKKLGKIKENLEQSRY 296


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 316 LSLNTWVYDLEKYIYDNNIAPIIKKNGKPVPNYDEVRY 429
           +SL  W    E YI  ++  P IKK GK   N ++ RY
Sbjct: 263 VSLGWW----ENYISRHSPIPFIKKLGKIKENLEQSRY 296


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 316 LSLNTWVYDLEKYIYDNNIAPIIKKNGKPVPNYDEVRY 429
           +SL  W    E YI  ++  P IKK GK   N ++ RY
Sbjct: 263 VSLGWW----ENYISRHSPIPFIKKLGKIKENLEQSRY 296


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 510 TNGFVINRYLNRIS 469
           TNG VINR   R+S
Sbjct: 648 TNGIVINRASKRVS 661


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 499 CN*SVP*SHLPTRHENYRAVKIH 431
           C+  +   HL  +H+NY  ++ H
Sbjct: 17  CSHRIVREHLGLKHDNYYELETH 39


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 499 CN*SVP*SHLPTRHENYRAVKIH 431
           C+  +   HL  +H+NY  ++ H
Sbjct: 331 CSHRIVREHLGLKHDNYYELETH 353


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 499 CN*SVP*SHLPTRHENYRAVKIH 431
           C+  +   HL  +H+NY  ++ H
Sbjct: 564 CSHRIVREHLGLKHDNYYELETH 586


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 499 CN*SVP*SHLPTRHENYRAVKIH 431
           C+  +   HL  +H+NY  ++ H
Sbjct: 564 CSHRIVREHLGLKHDNYYELETH 586


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,845
Number of Sequences: 336
Number of extensions: 3569
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)