Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0445
         (598 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0293 + 2207782-2208148,2208515-2208567,2208622-2208698,220...    30   1.6  
01_06_1783 + 39845998-39846174,39846260-39846534,39846758-398468...    29   2.8  
12_01_0603 + 4937472-4938351,4938597-4938689,4938820-4939589,493...    29   3.7  
02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722           28   4.9  
08_02_1305 - 26013022-26014107                                         28   6.5  

>11_01_0293 +
           2207782-2208148,2208515-2208567,2208622-2208698,
           2209377-2209772,2209953-2210111,2210522-2210933
          Length = 487

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 49  VQRLLRDQSREQFDVIIAEWMFSDLYASFHAVLDCPLI 162
           V+     +  E+ D+   EW+++D Y  +H+  DCP +
Sbjct: 54  VEARAEGEEEEECDLFDGEWVWNDSYPLYHST-DCPFL 90


>01_06_1783 +
           39845998-39846174,39846260-39846534,39846758-39846891,
           39846992-39847116,39847312-39847494,39847610-39847644,
           39847756-39847912,39847936-39848049,39848143-39848235,
           39848316-39848455,39848606-39848676,39848759-39848839,
           39851475-39851954,39852110-39852387,39853346-39854143
          Length = 1046

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
 Frame = +1

Query: 331 WVYDLEKYIYDNNIAPIIKK------NGKPVPNYDEVRY 429
           WV+D    +Y NN  PII +      NG+P  +Y+  R+
Sbjct: 698 WVFDSSGPLYTNNSCPIITQMQNCQGNGRPDKDYENYRW 736


>12_01_0603 +
           4937472-4938351,4938597-4938689,4938820-4939589,
           4939706-4939809,4940026-4940548,4940697-4941074
          Length = 915

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +1

Query: 190 MVLRLIDEY---PNPAYTSHFQDSFEVPFTF 273
           +V+R +DE    P+P YT  F+D FE  F F
Sbjct: 71  LVIRPVDESGPSPHPGYTLVFEDFFEAGFRF 101


>02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722
          Length = 1155

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = +1

Query: 355 IYDNNIAPIIKKNGKPVPNYDEVRYNGSLLLGNSHVSLGDAIKVPINYKAIGGYHIDGKV 534
           I +NNI   I ++   + N DE+    +LL+G+   SLG+  K  +N  ++   +  G +
Sbjct: 521 ITNNNITGTIPESIGNLVNLDELDMENNLLMGSLPASLGNLKK--LNRLSLSNNNFSGSI 578

Query: 535 KELPPDLQKI 564
                +L K+
Sbjct: 579 PVTLGNLTKL 588


>08_02_1305 - 26013022-26014107
          Length = 361

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 469 GDAIKVPINYKAIGGYHIDGKVKELPP 549
           GD  +VP+    + G H+DG +  LPP
Sbjct: 140 GDGNRVPLPSPGVTGGHLDGGLLPLPP 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,430,935
Number of Sequences: 37544
Number of extensions: 345391
Number of successful extensions: 775
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)