Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0445
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 30 1.6
SB_52311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_35569| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_166| Best HMM Match : Myb_DNA-binding (HMM E-Value=6.7) 29 2.2
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 29 3.8
SB_12036| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 3.8
SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0) 28 5.0
SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_19293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_16551| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29) 28 6.6
SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_9755| Best HMM Match : Sushi (HMM E-Value=0) 27 8.7
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16) 27 8.7
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 27 8.7
>SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1019
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 394 GKPVPNYDEVRYNGSLLLGNSHVSLGDAIKVPINYKAIGGYHIDGKVKELPPDLQKI 564
G P+ D G L+G H ++ AIK + K + G ++ ++ +LPPD ++
Sbjct: 840 GSPLYRLDPFLDTGFWLIGG-HATVTKAIKDCVTCKKLRGRPLEQRMADLPPDRTEV 895
>SB_52311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 182 LIGWFSD*SMNIQTQRTPHTFRTASKYHLRSWKGCLYYHHNLR 310
+I ++ ++ I +Q +T S+YH + L YHHNLR
Sbjct: 19 IISQYNSNTIAIISQYNSNTIAIPSQYHCNTITITLQYHHNLR 61
>SB_35569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 170 QRSNLIGWFSD*SMNIQTQRTPHTFRTASKYHLRSWKGCLYYH 298
+R+ GWF D S+NI + R TFR A++ S+ C H
Sbjct: 29 KRAACTGWFDDMSINIDS-RKRCTFRAATQSGSISFSSCCTIH 70
>SB_166| Best HMM Match : Myb_DNA-binding (HMM E-Value=6.7)
Length = 380
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 346 EKYIYDNNIAPIIKKNGKPVPNYDEVRYNGSLLL 447
E+ I +N ++P ++ KP+PNY + GS +L
Sbjct: 90 EREILENLVSPEKTESPKPIPNYSMTQGRGSCIL 123
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -2
Query: 492 NRYLNRISQRDMRITEQ*RSIVSHFVIVRYWFTVLFYYRSNIVVV--YILFKI 340
N Y+N + + D +T+ + +S R W+ VLF++ +I VV YILF++
Sbjct: 492 NSYMNGVDRSDQLMTKN--NALSK---CRRWWKVLFFHMIDIAVVNSYILFQL 539
>SB_12036| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 646
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 358 YDNNIAPIIKKNGKPVPNYDEVRYNGSLLLGNSHVSLGDA 477
+ NN+ I PV Y + Y + G +H+S+ DA
Sbjct: 419 HSNNLRKFIDNRTHPVKYYGPINYRTDVTSGTTHLSVVDA 458
>SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 768
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -3
Query: 350 FSRSYTH--VFKLKLHVSCDDSTDILSTNVNGTSKLS*KCEVYAGFGYSSINLRTIQ*GS 177
FS+ + H V L ++ C DI+ NG + +VY G N+ G
Sbjct: 437 FSKKFRHRGVEHLSTYLKCYKVGDIVDVKANGAVQKGMPHKVYHGKTGRVYNVTKRALGV 496
Query: 176 IVENQIKGQ 150
+V Q+KG+
Sbjct: 497 VVNKQVKGK 505
>SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 492 NRYLNRISQRDMRITEQ*RSIVSHFVIVRYWFTVLFYYRSNIVVV--YILFKI 340
N Y+N + + D +T+ +S R W+ VLF++ +I VV YILF++
Sbjct: 492 NSYMNGVDRSDQLMTKN--KALSK---CRRWWKVLFFHMIDIAVVNSYILFQL 539
>SB_19293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 438 RSIVSHFVIVRYWFTVLFYYRSNIVVVYILFKIVYPRI 325
R ++ H +I + +FY +V+V ILF +VY I
Sbjct: 909 RGVLLHILINIIFILTIFYIIIIVVIVLILFAVVYMTI 946
>SB_16551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 371 ILLSYIYFSRSYTHVFKLKLHVSCDD 294
+L++Y+ F S+ F++ LH+ CDD
Sbjct: 759 MLMAYVTFLISWRAFFQIDLHLHCDD 784
>SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 88 DVIIAEWMFSDLYASFHAVLDCPLIWFSTIEPHWMVLRLIDEY 216
D ++ W F DL + VLD L+++ ++ LR++D +
Sbjct: 22 DAVLLYWRFLDLILRYLRVLDAVLLYWRFLDLILRYLRVLDAH 64
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 400 VYRSFLL*EQYCCRIYTFQDRIPTYL 323
+YR+F++ E + CRI F RI YL
Sbjct: 1668 LYRTFVIFEPFICRIVPFLCRIVPYL 1693
>SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29)
Length = 551
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 292 VQTSFPRT*MVLRSCPESVRCTLGLD 215
+QT PR + LR C ESV C L L+
Sbjct: 260 MQTKLPRMKIKLRLCSESVSCLLVLE 285
>SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +1
Query: 271 FVERMSVLSSQLTWSLSLNTWVYDLEKYIYDNNIAPIIKKNGKPVPNYDEVRYNGSLLLG 450
FV+R V + W N WV + + Y + G+ PN E++ N LL
Sbjct: 660 FVQRYFVRRITIRWIGIFNRWVVPIRQKTYPGH-------RGQTDPNSTEIQRNLVCLLM 712
Query: 451 NSHVSLGDAI 480
S V+ G I
Sbjct: 713 ESWVAFGPVI 722
>SB_9755| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1351
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 329 VFKLKLHVSCDDSTDILSTNVNGTSK 252
VF + SCD+ D+L +NVNG +
Sbjct: 648 VFPNIIKFSCDEGFDLLGSNVNGMGR 673
>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
Length = 3999
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 331 WVYDLEKYIYDNNIAPIIKKNGKPV-PNYDEVRYNGSLLLGNSHVSLGDAIKVPINYKAI 507
WV +++ + Y P++ G+P P R NG G ++++ D +++ A+
Sbjct: 1548 WVLNMQPWSYSTLYKPVLY--GEPGNPGLFSARCNGGSGGGRLNLTVRDTLQIDGVISAM 1605
Query: 508 GGYHIDG 528
GG DG
Sbjct: 1606 GGNSSDG 1612
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 329 VFKLKLHVSCDDSTDILSTNVNGTSK 252
VF + SCD+ D+L +NVNG +
Sbjct: 79 VFPNIIKFSCDEGFDLLGSNVNGMGR 104
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,271,903
Number of Sequences: 59808
Number of extensions: 410624
Number of successful extensions: 1104
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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