Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0444
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   9.3  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -3

Query: 218 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY 93
           +N+ D  +    + V+     I   E    +   +NR P+W+
Sbjct: 397 SNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVWF 438


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -3

Query: 218 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY 93
           +N+ D  +    + V+     I   E    +   +NR P+W+
Sbjct: 397 SNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVWF 438


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 565 LDKVYVWLISTGGTSGVLKV 624
           LD++++W+ +   T+G L +
Sbjct: 481 LDRLFLWVFTLACTAGTLGI 500


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,662
Number of Sequences: 438
Number of extensions: 3532
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)