Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0443
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.4  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   5.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   5.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   5.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   5.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 685 YHKYVVKTEPVNMEKRVYKGYSVGSF 608
           YH Y +  +P N ++ +Y    + SF
Sbjct: 429 YHSYKMHQKPYNKDEIIYPNLKIESF 454


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 685 YHKYVVKTEPVNMEKRVYKGYSVGSF 608
           YH Y +  +P N ++ +Y    + SF
Sbjct: 429 YHSYKMHQKPYNKDEIIYPNLKIESF 454


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 224 SLSVKSVYGR*YYLITS*RNIDEKLYTFMNFIELLSL 114
           SLS  +++   Y    +  N ++KLY  +N+IE + +
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 224 SLSVKSVYGR*YYLITS*RNIDEKLYTFMNFIELLSL 114
           SLS  +++   Y    +  N ++KLY  +N+IE + +
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 224 SLSVKSVYGR*YYLITS*RNIDEKLYTFMNFIELLSL 114
           SLS  +++   Y    +  N ++KLY  +N+IE + +
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 224 SLSVKSVYGR*YYLITS*RNIDEKLYTFMNFIELLSL 114
           SLS  +++   Y    +  N ++KLY  +N+IE + +
Sbjct: 84  SLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,246
Number of Sequences: 438
Number of extensions: 4862
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)