Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0442
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 36 0.004
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 35 0.010
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 35 0.010
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 31 0.12
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 31 0.16
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 31 0.21
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 29 0.49
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 29 0.65
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.1
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.5
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 1.5
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 2.0
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 2.6
SPAC1A6.06c |meu31||sequence orphan|Schizosaccharomyces pombe|ch... 27 2.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.5
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 26 4.6
SPAC17C9.02c |lys7||alpha-aminoadipate reductase phosphopantethe... 26 4.6
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 26 6.1
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 6.1
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 26 6.1
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 26 6.1
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 25 8.0
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 25 8.0
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 8.0
SPBC691.05c ||SPBP22H7.01c|membrane transporter |Schizosaccharom... 25 8.0
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 8.0
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 36.3 bits (80), Expect = 0.004
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERR-PQELPELKKEDPKSCKS*R 242
QRLK EE +R + L ++E K +R++ + Q+ E E+RR QE + K+++ ++ +
Sbjct: 128 QRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREKRM 187
Query: 243 KKT 251
K+T
Sbjct: 188 KET 190
Score = 36.3 bits (80), Expect = 0.004
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +2
Query: 62 MPEVEERRAQEMPEVEERRAQELPEVEERR-SPRAARG*RKKTPRAARVEER-RPQELQE 235
+ + EERR +E+ E E++ + + +EE++ R +++ A R EE R + ++E
Sbjct: 130 LKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREKRMKE 189
Query: 236 LKKEDPKSCKS*RKKTPRAARVEVSRP-QEQQELKKVDPKSCKS*RK*TPRAARV 397
K+DP+ + + EV P E++ELK RK TPR ++
Sbjct: 190 TFKDDPEEDSNMAWSIIHKIKTEVVAPISEKKELKNY---CFTQKRKITPRLGQI 241
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLK-----KEEPKSCQRLKKEDPQELPEVEERRPQELPELKK 212
EE +R + L ++E K +R++ K + +RLK+E + EE R + + E K
Sbjct: 133 EEERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREKRMKETFK 192
Query: 213 EDPK 224
+DP+
Sbjct: 193 DDPE 196
Score = 29.9 bits (64), Expect = 0.37
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS*RK 245
QRL++E R KK QRLK E+ + E+ E+ +E ++ + + K +
Sbjct: 106 QRLEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQ 165
Query: 246 KTPRAARVEERRPQE 290
+ + +++ +R +E
Sbjct: 166 RRLKQEQIDAKRKEE 180
Score = 28.7 bits (61), Expect = 0.86
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = +2
Query: 80 RRAQEMPEVEERRAQELPEVEERRSPRAARG*RKKTPRAARVEERRPQELQELKKEDPKS 259
R E +E R Q L + EERR +K+ R +EE++ +E ++ + + +
Sbjct: 115 RELLEKKRIEAER-QRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLKQEQI 173
Query: 260 CKS*RKKTPRAARVEVSRPQEQQELKKVDPKSCKS*RK*TPRAARVEERRPKEAY*AFTS 439
+++ R R++ + + +E + + T A + E++ + Y FT
Sbjct: 174 DAKRKEEEAREKRMKETFKDDPEEDSNMAWSIIHKIK--TEVVAPISEKKELKNY-CFTQ 230
Query: 440 VRPSVAPVRLPFVT--TTKHVSIAN*INNNIQKVRNT 544
R + P RL +T ++ + I + Q+ RNT
Sbjct: 231 KR-KITP-RLGQITKSNSQIMKITQLLQQTFQEARNT 265
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 35.1 bits (77), Expect = 0.010
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Frame = +2
Query: 74 EERRAQEMPEVEE----RRAQELPEVEERRSPRAARG*RKKTPRAARVEERRPQELQELK 241
++R+A+ + E+EE ++ +EL ++ E+ R +KK + A+ EER+ +E + L
Sbjct: 566 QQRQAKLLEEIEEENKRKQERELKKIREKEKKRD----KKKQLKLAKEEERQRREAERLA 621
Query: 242 KE-DPKSCKS*RKKTPRAARVE--VSRPQE--QQELKK 340
++ K+ ++ R++ R R E + R QE QQEL++
Sbjct: 622 EQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELER 659
Score = 35.1 bits (77), Expect = 0.010
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = +3
Query: 57 KRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS 236
+ +RL ++ ++ K++E + KK + Q L +E++ QEL K+E+ + K
Sbjct: 615 REAERLAEQAAQKALEAKRQE----EARKKREEQRLKREQEKKQQELERQKREEKQKQKE 670
Query: 237 *RKKTPR----AARVEERRPQELQELK*VDPXXXXXXXXXIPRAARVEESRPQELQELKK 404
KK + A R + R Q L+E + + EE R +EL E +
Sbjct: 671 REKKLKKQQQEADREKMAREQRLREEE--EKRILEERKRREKLDKEEEERRRRELLEKES 728
Query: 405 EDPKRLIEHLR 437
E+ +R + +
Sbjct: 729 EEKERRLREAK 739
Score = 31.9 bits (69), Expect = 0.092
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS*RK 245
++ KK + K+ +L KEE + + ++ Q + E + QE K+E+ + + K
Sbjct: 593 EKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEK 652
Query: 246 KTPRAARV--EERRPQELQELK*VDPXXXXXXXXXIPRAARVEESRPQELQELKKEDPK 416
K R EE++ Q+ +E K + + R R+ E + + E +K K
Sbjct: 653 KQQELERQKREEKQKQKEREKK-LKKQQQEADREKMAREQRLREEEEKRILEERKRREK 710
Score = 30.3 bits (65), Expect = 0.28
Identities = 21/86 (24%), Positives = 44/86 (51%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKS 227
+E +R +R +K++ K ++ K++ + R K Q L E EE+R E + +++ K
Sbjct: 655 QELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKE 714
Query: 228 CKS*RKKTPRAARVEERRPQELQELK 305
+ R++ + E + + L+E K
Sbjct: 715 -EEERRRRELLEKESEEKERRLREAK 739
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 302 EVSRPQEQQELKKVDPKSCKS*RK*TPRAARVEERRPKEA 421
E ++ ++++ELKK+ K K +K + A+ EER+ +EA
Sbjct: 578 EENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREA 617
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 35.1 bits (77), Expect = 0.010
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPK- 224
EEPK + E PK+C K E+P+ K E+P + E P+ E K E+ +
Sbjct: 148 EEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPEYHTESKNEESEH 207
Query: 225 SCKS*RKK 248
+ KS R++
Sbjct: 208 NTKSIREE 215
Score = 28.7 bits (61), Expect = 0.86
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKS 227
E PK+C K E+P+ K EEP + +P+ E + + + +E+P
Sbjct: 159 EGPKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPEYHTESKNEESEHNTKSIREEPIH 218
Query: 228 CKS*RKKTPRAARVEERRPQELQE 299
+ + P +++ E+ E E
Sbjct: 219 HVDSKNEEPVYSKIPEKMGDEFSE 242
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQ 158
+E + + K EEPK + E PK C K E P+
Sbjct: 137 DESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEKPE 173
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 111 KEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS*RKKTPRAA 263
K +PK KE ELPEV E++ ++ PE +K+D K +KK R +
Sbjct: 39 KYQPKGAM---KEVIYELPEVHEKKDKK-PEKRKKDQKEASEKKKKGKRTS 85
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 31.1 bits (67), Expect = 0.16
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 62 MPEVEERRAQEM-PEVEERRAQELPEVEERRSPRAARG*RKKTPRAARVEER-RPQELQE 235
+ E+ R M E+ ER AQE E+ + + + K+ R + EE+ R E +
Sbjct: 690 LEEIARRNVDPMVSELSERAAQERERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKR 749
Query: 236 LKKEDPKSCKS*RKKTPRA 292
L+KE K K +++ A
Sbjct: 750 LQKERAKYAKQMSRESAHA 768
Score = 28.7 bits (61), Expect = 0.86
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 99 QRLKKEEPKSCQRLKK--EDPQELPEVEER-RPQELPELKKEDPKSCKS*RKKTPRA 260
+R +KE+ K +RLKK ++ + L + EE+ R E L+KE K K +++ A
Sbjct: 712 ERERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRESAHA 768
Score = 28.7 bits (61), Expect = 0.86
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQE 194
+R +KE+ K +RLKK K +RLKK++ ++ + EE+R Q+
Sbjct: 712 ERERKEQAKEAKRLKK-LAKEEKRLKKKE-EKARKAEEKRLQK 752
Score = 26.2 bits (55), Expect = 4.6
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 134 EVEERRSPRAARG*RKKTPRAARVEERR---PQELQELKKEDPKSCKS*RKKTPRAARVE 304
E ERR +A R ++ A + R P+EL+E+ + + S + R
Sbjct: 656 EALERRLSKAYRMEAQEEAYAINIGGGRVISPEELEEIARRNVDPMVSELSERAAQERER 715
Query: 305 VSRPQEQQELKKVDPKSCKS*RK*TPRAARVEERR 409
+ +E + LKK+ K K +K +A + EE+R
Sbjct: 716 KEQAKEAKRLKKL-AKEEKRLKKKEEKARKAEEKR 749
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 30.7 bits (66), Expect = 0.21
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 105 LKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS*RKKTPRAARVEERRP 284
++K+ K E P+E+ E+ +P LKK + + K ++K A EE++
Sbjct: 4 MEKQVENLSLEAKNEKPKEVILGEDGKPLSKKALKKLEKEREKEQKRKEREAREAEEKKK 63
Query: 285 QELQEL 302
+E E+
Sbjct: 64 REANEI 69
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 29.5 bits (63), Expect = 0.49
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 140 EERRSPRAARG*RKKTPRAARVEERRPQELQELKKEDPKSCKS*RKKTPRAARVEVSRPQ 319
E R ++AR K+ ++ +RR QELQEL+K++ + + +V + +
Sbjct: 90 ESEREQKSARK-VKRAELEEKLAKRREQELQELEKQEKIEAEILESRLQEQRKVALDELE 148
Query: 320 -EQQELKKV 343
++ +LKKV
Sbjct: 149 LDRNDLKKV 157
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 29.1 bits (62), Expect = 0.65
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 75 KKEEPKRCQRLKKEEPKSCQRLKKE--DPQELPEVEERRPQELPELKKED 218
KKE + + +K E P+ ++ KE +P+E P+ E PQE E ++E+
Sbjct: 91 KKETIQPPEEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEEEE 140
Score = 25.8 bits (54), Expect = 6.1
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 108 KKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS*RKKTPRAARVEERRPQ 287
+KEE K + +E E P+ EE+ +E E +E PK + P+ EE +
Sbjct: 87 EKEEKKETIQPPEEVKTEPPQPEEKEGKEAKE-PEEPPKE----EAEEPQEGGEEEEEEE 141
Query: 288 ELQEL 302
E +E+
Sbjct: 142 EEEEI 146
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKE--EPKSCQRLKKEDPQELPEVEERRPQE 194
+ +K E P+ ++ KE EP+ + + E+PQE E EE +E
Sbjct: 99 EEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEEEEEEE 143
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 51 EPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSC 230
EP + + + +E K + KEE + Q +E+ +E E E P E + D C
Sbjct: 104 EPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEEEEEEEEEITDPLEKMTQECMDAPDC 163
Query: 231 K 233
K
Sbjct: 164 K 164
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 75 KKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS*RKKTP 254
K+ + QR+++EE + E+ + L EVEE R +E KKE + K K
Sbjct: 257 KRAREEEEQRIREEEARIA-----EEEKRLAEVEEARKEEARLKKKEKERKKKEEMKAQG 311
Query: 255 RAARVEERRPQELQE 299
+ +++ Q L +
Sbjct: 312 KYLSKKQKEQQALAQ 326
Score = 26.2 bits (55), Expect = 4.6
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPE 203
E K RLKK+E +R KKEE K+ + + +E + +RR Q++ E
Sbjct: 286 EARKEEARLKKKEK---ERKKKEEMKAQGKYLSKKQKEQQALAQRRLQQMLE 334
Score = 25.8 bits (54), Expect = 6.1
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Frame = +3
Query: 60 RCQRLKKEEPKRCQRLKKEEPKSCQRLKK-EDPQELPEVEERRPQELPELKKEDPKSCKS 236
+ ++ K+ E K ++L+K++ ++ ++ ED EV P K ++
Sbjct: 178 KTKKEKEREKKEREKLRKKQQQAKKKGSTGEDTLASSEVSSEVDISTPAENDSSAKGKQA 237
Query: 237 *--RKKTPRAARV----EERRPQELQELK*VDPXXXXXXXXXIPRAARVEESRPQELQEL 398
++K P + EE+R +E +E + + R A VEE+R +E +
Sbjct: 238 AGSKRKGPNVTALQKMLEEKRAREEEEQRIREEEARIAEEEK--RLAEVEEARKEEARLK 295
Query: 399 KKEDPKRLIEHLR 437
KKE ++ E ++
Sbjct: 296 KKEKERKKKEEMK 308
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 77 ERRAQEMPEVEERRAQELPEVEERRSPRAARG*RKKTPRAARVEERRPQELQ 232
E+R ++ +++E + +E E+ RAA + +T R A+ + R + LQ
Sbjct: 36 EKRMEQKRKLDEIKEREKELKREKEEQRAAHAEKIRTRRQAKADRERMELLQ 87
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRC--QRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDP 221
E ++ +R +E+ KR ++ K+E + +R +E+ + E EE+ +E E K +
Sbjct: 564 EAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR--EAEEKAKREAEEKAKREA 621
Query: 222 KSCKS*RKKTPRAAR-VEERRPQELQE 299
+ K+ R+ +A R EE+ +E +E
Sbjct: 622 EE-KAKREAEEKAKREAEEKAKREAEE 647
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRC--QRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDP 221
E ++ +R +E+ KR ++ K+E ++ +R +E + E EE+ +E E K +
Sbjct: 572 EAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKR--EAEEKAKREAEEKAKREA 629
Query: 222 KSCKS*RKKTPRAAR-VEERRPQELQE 299
+ K+ R+ +A R EE+ +E +E
Sbjct: 630 EE-KAKREAEEKAKREAEEKAKREAEE 655
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKEEPK--SCQRLKKEDPQELP-EVEERRPQELPELKKEDPKSCKS 236
+ K+E ++ +R +E+ K + ++ K+E ++ E EE+ +E E K + + K+
Sbjct: 599 ENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEE-KA 657
Query: 237 *RKKTPRAAR-VEERRPQELQE 299
R+ A R EE+ +E +E
Sbjct: 658 KREAEENAKREAEEKAKREAEE 679
Score = 25.4 bits (53), Expect = 8.0
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKEEPK--SCQRLKKEDPQELP-EVEERRPQELPELKKEDPKSCKS 236
++ K+E ++ +R +E+ K + ++ K+E ++ E EE+ +E E K + + K+
Sbjct: 615 EKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEE-KA 673
Query: 237 *RKKTPRAAR-VEERRPQELQE 299
R+ A R EE+ +E +E
Sbjct: 674 KREAEENAKREAEEKVKRETEE 695
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 209 LQLWQLLGSSFFNLWQLLGIFFLQPLAALGLFFLQP 102
L LW+LL FFN W+L+ + + L L F+QP
Sbjct: 236 LFLWKLL---FFNHWKLVALITITKLIQDVLAFVQP 268
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 92 EMPEVEERRAQELPEVEERRSPRAARG*RKKTPRAARVEERRPQELQELKKEDPKSCKS* 271
E P+ E + + E E + P + TP A++VEE + ++ +++ +
Sbjct: 426 ETPKPEAQPVSKPKESAEEQKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEETVTQPK 485
Query: 272 RKKTP 286
R+KTP
Sbjct: 486 REKTP 490
>SPAC1A6.06c |meu31||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 185
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -3
Query: 254 WGLLSSTLAALGVFFLQLWQLLGSSFFNLWQLLGIFFLQPLAALGLFF 111
WG+ + A+G+FF +L LW + FF L + + +
Sbjct: 49 WGIETMLFGAIGIFFAWKKKLSWEHLVLLWSTIDAFFSMCLRSCTIIY 96
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQ-ELPEVEERRPQELPELKKEDPK 224
E+P + +++ KE K + + S ++ KKE + PE ++ ++ + KK++
Sbjct: 24 EKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEES 83
Query: 225 SCKS 236
S +S
Sbjct: 84 SSES 87
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 206 EERRPQELQELKKEDPKSCKS*RKKTPRAARVEVSRPQ 319
EER QELQ+L + + K R+K + + E+ R Q
Sbjct: 351 EERLDQELQDLSEAERVKLKRERRKANQRKQREIVRMQ 388
>SPAC17C9.02c |lys7||alpha-aminoadipate reductase
phosphopantetheinyl transferase Lys7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 278 SFFNSCSSWGLLSSTLAALGVFFLQLW 198
S F C W L+ S+++++ VFFL LW
Sbjct: 145 SVFTPCE-WKLIKSSISSIDVFFL-LW 169
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 151 IPKSCQRLKKEDPKSCQS*RKKTPRAA---RVEERRPQELQELKKE 279
+PK + +KK+ KS ++ T RA+ + E+R+ + ++++KKE
Sbjct: 421 LPKPSKEMKKKLKKSPPKRKRITTRASYDRQKEQRKKEYIKKVKKE 466
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/61 (18%), Positives = 31/61 (50%)
Frame = +3
Query: 66 QRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKEDPKSCKS*RK 245
++ ++E+ ++ ++E+ ++ ++ED E + E E + ++ED K R+
Sbjct: 122 KKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKARE 181
Query: 246 K 248
+
Sbjct: 182 E 182
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/57 (17%), Positives = 29/57 (50%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKED 218
E+ ++ ++E+ ++ ++E+ ++ ++ED E + E E + ++ED
Sbjct: 127 EDKAEWKKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKAREED 183
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 25.8 bits (54), Expect = 6.1
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 68 EVEERRAQEMPEVEERRAQELPEVEERRSPRAARG*RKKTPRAARVEER-RPQELQELKK 244
+V + QE P + + + L +E + R R ++ + R EER R E E+ K
Sbjct: 20 DVSKNETQEQPVLSKSALKRLKRQQEWDAGREKRAEMRREKKRLRKEERKRKIEAGEVVK 79
Query: 245 EDPKSCKS*RKKTPRAARV 301
K + K P + R+
Sbjct: 80 SQKKRIRL-GKVVPSSIRI 97
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 81 EEPKRCQRLKKEEPKSCQRLKKE 149
EE +R + KE+ + CQ+L+KE
Sbjct: 932 EEYERIDAMAKEQSRICQKLEKE 954
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKE 116
EE +R + KE+ + CQ+L+KE
Sbjct: 932 EEYERIDAMAKEQSRICQKLEKE 954
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 8.0
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 48 EEPKRCQRLKKEEPKRCQRLKKEEPKSCQRLKKEDPQELPEVEERRPQELPELKKE 215
E+ K+ + ++ E + KKEE +R KKE +E E +E++ ++ + K E
Sbjct: 423 EDSKKRKSVESSEKDEDEAAKKEE----KRRKKEAKKEKKEKKEKKEKKEKKKKSE 474
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 328 RVEESRSQELQELKKVDPKSCKS 396
R EE + Q ++K+D +SCKS
Sbjct: 279 RTEERFNNMAQTMQKIDDRSCKS 301
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 153 PQELPEVEERRPQELPELKKE 215
P+E+P+V E+ P LP LK +
Sbjct: 731 PKEVPKVPEKAPFFLPSLKDQ 751
>SPBC691.05c ||SPBP22H7.01c|membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 668
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 221 GVFFLQLWQLLGSSFFNLWQLLGIFFLQPLAALGLFFLQ 105
GVF L W +LG F + + F +A G FF+Q
Sbjct: 191 GVFVLSFWGILGYYFLRPYSYI---FAIGVALWGAFFIQ 226
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 188 GSSFFNLWQLLGIFFLQPLAALGLFFLQPLASLGLFFLQ 72
G + W +LG +FL+P + + F +A G FF+Q
Sbjct: 191 GVFVLSFWGILGYYFLRPYSYI---FAIGVALWGAFFIQ 226
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/89 (21%), Positives = 39/89 (43%)
Frame = +2
Query: 221 QELQELKKEDPKSCKS*RKKTPRAARVEVSRPQEQQELKKVDPKSCKS*RK*TPRAARVE 400
Q ++ LK +DP + K +A+ + + ++DP++C +V
Sbjct: 116 QHIRLLKTKDPNRIMALLKFKDQASVIRFYTEFNGKAFSQIDPETCH-----VLHIDKVN 170
Query: 401 ERRPKEAY*AFTSVRPSVAPVRLPFVTTT 487
+ P E+ + ++ + V P PF +TT
Sbjct: 171 IKYPMESSDSSSTEQQLVGPSSKPFASTT 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,917,987
Number of Sequences: 5004
Number of extensions: 33868
Number of successful extensions: 280
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -