Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0440
(771 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 5e-38
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 120 1e-27
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 120 2e-27
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 105 4e-23
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 77 1e-14
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 69 6e-12
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 64 2e-10
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 63 2e-10
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 63 2e-10
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 62 5e-10
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 61 1e-09
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 60 3e-09
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 58 8e-09
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 58 8e-09
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 57 1e-08
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 54 1e-07
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 51 1e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 5e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 48 8e-06
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 36 0.036
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 36 0.048
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 33 0.34
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.4
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 3.1
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 29 3.1
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 29 4.2
SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13) 28 7.3
SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3) 28 9.6
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 155 bits (375), Expect = 5e-38
Identities = 70/164 (42%), Positives = 100/164 (60%)
Frame = +3
Query: 276 PNWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 455
P + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 456 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR 635
+ ++ + Y +PT IQ Q PIA+SG++++G+A+TGSGKT A++ PA+VHI +QP ++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 636 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 767
GDGPI L+ APTREL QQI A FG + VFGG K
Sbjct: 587 VGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNK 630
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 120 bits (290), Expect = 1e-27
Identities = 65/140 (46%), Positives = 85/140 (60%)
Frame = +3
Query: 348 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 527
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 528 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 707
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA
Sbjct: 113 --------------------FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVA 152
Query: 708 ADFGHTSYVRNTCVFGGAPK 767
G +R+TC++GGAPK
Sbjct: 153 YSVGKHCKLRSTCIYGGAPK 172
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 120 bits (288), Expect = 2e-27
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
Frame = +3
Query: 372 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 551
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 552 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 719
GVA+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFG 202
Query: 720 HTSYVRNTCVFGGAPK 767
+R V GGA +
Sbjct: 203 RPLGIRTVSVIGGADR 218
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 105 bits (252), Expect = 4e-23
Identities = 50/130 (38%), Positives = 77/130 (59%)
Frame = +3
Query: 306 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 485
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 486 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 665
++ PTPIQ Q MSG++++G+A+TGSGKTLAY LP + + + P GD P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 666 APTRELAQQI 695
PTREL QQ+
Sbjct: 152 TPTRELMQQV 161
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 90.2 bits (214), Expect = 2e-18
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Frame = +3
Query: 387 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 566
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 567 GSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 734
GSGKT A++LP + + N P A+ +APTRELA QI A F H + +
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTML 817
Query: 735 RNTCVFGG 758
R +GG
Sbjct: 818 RPVVCYGG 825
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 89.4 bits (212), Expect = 3e-18
Identities = 47/121 (38%), Positives = 66/121 (54%)
Frame = +3
Query: 396 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 575
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ AQTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 576 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 755
KT AY+LP + + Q P+AL +APTRELA+QI A F + ++ +G
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 756 G 758
G
Sbjct: 589 G 589
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 77.4 bits (182), Expect = 1e-14
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = +3
Query: 423 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 602
++ F + G+ G+ PT IQ QG P+A+SG++++G A+TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 603 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 758
I + Q DG ALV++PTRELA Q +V G+ + + GG
Sbjct: 109 IETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGG 159
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +3
Query: 321 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 500
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 501 PIQAQGWPIAMSGKNLVGVAQTGSGKTL 584
PIQ Q P+ +SG++++ A TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 288 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQ 464
+V QPF K+FY P + K +P E +E+R + E + V G P++ + + +
Sbjct: 58 TVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKIL 117
Query: 465 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 566
+K Y++PTPIQAQ P+ MSG++++ + T
Sbjct: 118 DVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +3
Query: 576 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 755
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 756 G 758
G
Sbjct: 181 G 181
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = +3
Query: 465 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 644
QG+K MG+ T IQ + + G++L+G A+TGSGKTLA+++P +V + + + +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRN 643
Query: 645 GPIALVLAPTRELAQQIQQVAAD 713
G ++++PTREL+ Q VA D
Sbjct: 644 GTGVIIISPTRELSLQTYGVARD 666
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +3
Query: 501 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTR 677
PIQA + G++++G A+TG+GKTL++ LP + + + + +RG P LV+APTR
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTR 157
Query: 678 ELAQQIQQVAADFGHTSYVRNTCVFGGAPKE 770
ELA+Q+ + S + C++GG P E
Sbjct: 158 ELAKQVGNEFENL--KSNLEVYCIYGGMPYE 186
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/96 (33%), Positives = 55/96 (57%)
Frame = +3
Query: 432 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 611
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 612 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 719
+ + ALVL PTRELA Q Q+ + G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/96 (33%), Positives = 55/96 (57%)
Frame = +3
Query: 432 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 611
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 612 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 719
+ + ALVL PTRELA Q Q+ + G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 62.1 bits (144), Expect = 5e-10
Identities = 36/93 (38%), Positives = 50/93 (53%)
Frame = +3
Query: 480 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 659
MG K+PT IQ P + G++ +G A+TGSGKT A+ LP + + + P G A+
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP-----YGIFAV 79
Query: 660 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 758
VL PTRELA QI G ++ + GG
Sbjct: 80 VLTPTRELAFQIADQFKVLGRPIGLKEAVIVGG 112
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +3
Query: 465 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 644
+ V +G+ PTPIQA P+A+ GK++ A TG+GKT A++LP + + +P +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSP 80
Query: 645 GPIALVLAPTRELAQQ 692
LV+ PTRELA Q
Sbjct: 81 AIRVLVITPTRELAIQ 96
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 60.1 bits (139), Expect = 2e-09
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 17/124 (13%)
Frame = +3
Query: 450 PDYVQQGVKTMGYKEPTPIQAQGWPIAMS-GKNLVGVAQTGSGKTLAYILPAIVHIN--- 617
PD + + + G+ +PTPIQ+ P A+ ++++G A+TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYK 197
Query: 618 ----NQPPI-------RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG-- 758
Q P +G +AL++APTRELA Q++ + V+ + GG
Sbjct: 198 KRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMA 257
Query: 759 APKE 770
APK+
Sbjct: 258 APKQ 261
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 59.7 bits (138), Expect = 3e-09
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Frame = +3
Query: 387 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 566
EV + G P + F +Y + +G PT +Q WP + G+++ GVA
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 567 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 734
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 735 RNTCVFGGAPKE 770
R +FGG +E
Sbjct: 294 RVQMIFGGGAEE 305
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 58.4 bits (135), Expect = 6e-09
Identities = 34/95 (35%), Positives = 55/95 (57%)
Frame = +3
Query: 474 KTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 653
+T G+++P+ IQ + + G++++ AQ+G+GKT + + + I+ Q +R P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQ 67
Query: 654 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 758
ALVL+PTRELA QIQ+V G V+ GG
Sbjct: 68 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGG 102
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 58.4 bits (135), Expect = 6e-09
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = +3
Query: 522 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 701
P+ M GK++V +A+TGSGKT A+++P + G AL+L+PTRELA Q Q+
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTH---TAKVGIRALILSPTRELALQTQK 369
Query: 702 VAADFGHTSYVRNTCVFGG 758
+ G + ++++ + GG
Sbjct: 370 FIKELGRFTGLKSSVILGG 388
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 58.0 bits (134), Expect = 8e-09
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Frame = +3
Query: 384 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--NL 548
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N+
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 549 VGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HT 725
+ +Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H
Sbjct: 146 IAQSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHC 200
Query: 726 SYVR 737
+++
Sbjct: 201 PHIK 204
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 387 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 566
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 567 GSGKT 581
GSGKT
Sbjct: 181 GSGKT 185
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 57.2 bits (132), Expect = 1e-08
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Frame = +3
Query: 327 PHPTVLK-RSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 500
P TV K +E N T S + + F D V + + + +PT
Sbjct: 343 PEATVSKGEKEVTIEAVGQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPT 402
Query: 501 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVL 665
IQ P + +++ AQTGSGKTLAY+ P +VH + R G P A ++
Sbjct: 403 VIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIV 461
Query: 666 APTRELAQQIQQVAADFGHTSYVRNTCVFGG 758
P RELA QI + A H + R+ + GG
Sbjct: 462 VPARELATQILKTAKSLCHHARFRSVGLIGG 492
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +3
Query: 423 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 602
I FE+ + + + V GYK+PTP+Q PI ++L+ AQTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 603 IVHINNQPP 629
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 54.4 bits (125), Expect = 1e-07
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +3
Query: 450 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 629
P V++ +K MG +P PIQ + P S K+L+ ++TG+GK+L ++LP++ Q P
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP 222
Query: 630 IRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 734
RG G I ++ PTRELA Q + +V+ G S V
Sbjct: 223 -GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 531 MSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVA 707
+S ++++ AQ+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVV 179
Query: 708 ADFGHTSYVRNTCVFGG 758
G +V+ GG
Sbjct: 180 LALGDYMHVKCHACIGG 196
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/85 (29%), Positives = 49/85 (57%)
Frame = +3
Query: 465 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 644
+G+ G+++P+PIQ + P+ G +L+ A++G+GKT + + A+ ++ I +
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV-----ITESN 80
Query: 645 GPIALVLAPTRELAQQIQQVAADFG 719
++L PTRE+A Q++ V G
Sbjct: 81 CIQIIILTPTREIAVQVKDVICAIG 105
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 360 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 527
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 528 AMSGKNLVG 554
G G
Sbjct: 197 MAHGPKKSG 205
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 588 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 695
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 48.0 bits (109), Expect = 8e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +3
Query: 540 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 719
K+++G+A+TGSGKT A+ LP + + + P AL+L PTRELA QI + G
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALG 56
Query: 720 HTSYVRNTCVFGG 758
V+ + GG
Sbjct: 57 SGIGVKCAVIVGG 69
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 35.9 bits (79), Expect = 0.036
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 312 KNFYDPHPTVLKRSPYEVEEYRNNHEV-TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 488
K D + LK E +E+ N + TV+ + P+ E P V + + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 489 KEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 626
Q Q +SG + + V TG+GK+L Y LPA ++ P
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 35.5 bits (78), Expect = 0.048
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 648 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 758
P ALVL+PTRELA QIQ+V G V+ GG
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGG 40
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 483 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 608
GY + P+Q Q ++ K+ + + TG+GKT+ Y +PA++
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL 177
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 408 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 521
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 318 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 458
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -1
Query: 210 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 97
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +3
Query: 444 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAM-SGKNLVGVAQTGSGKTLAYILPAI----V 608
+ P Y Q + GY IQ++ A+ S +NL+ A TG+GKT +L +
Sbjct: 1098 SLPMYAQAAFE--GYPTLNRIQSRLCETALNSDENLLLCAPTGAGKTNVALLTILREIGK 1155
Query: 609 HINNQPPIRRGDGPIALVLAPTRELAQQI 695
HIN I + I + +AP R L Q++
Sbjct: 1156 HINLDGTINTEEFKI-IYVAPMRSLVQEM 1183
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 531 MSGKNLVGVAQTGSGKTLAYILPAIV 608
MSG + + + TG GK+L + LPA+V
Sbjct: 102 MSGVDCILIMPTGGGKSLCFQLPAVV 127
>SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13)
Length = 829
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1
Query: 288 NPNLGDACFDLQRILFSHQILQIL 217
+P L DACFDL+ IL H+IL ++
Sbjct: 376 SPTLIDACFDLE-ILARHKILNVV 398
>SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3)
Length = 333
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +3
Query: 483 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 647
G+ P+ Q S V A T T AY+ P +V PP+R G G
Sbjct: 231 GFSPTGPVNGQPTNSTSSSPFSVTSADTIINPTAAYVRPGMVPREIIPPLRDGSG 285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,315,962
Number of Sequences: 59808
Number of extensions: 509393
Number of successful extensions: 1379
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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