BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0440 (771 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 89 6e-20 DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 26 0.34 EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.6 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.6 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.6 >DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. Length = 630 Score = 88.6 bits (210), Expect = 6e-20 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 4/131 (3%) Frame = +3 Query: 378 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 557 +N +V VSG V PI+ FE A + V +K GYK+PTP+Q PI M+G++L+ Sbjct: 180 DNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMAC 239 Query: 558 AQTGSGKTLAYILPAIVHINNQP----PIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 725 AQTGSGKT A+ +P I + + P ++++PTREL QI Q F Sbjct: 240 AQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLN 299 Query: 726 SYVRNTCVFGG 758 S ++ +GG Sbjct: 300 SILKTVVAYGG 310 >DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein protein. Length = 424 Score = 26.2 bits (55), Expect = 0.34 Identities = 9/37 (24%), Positives = 19/37 (51%) Frame = +2 Query: 494 TDAHSSSRLADSYVWKEFSWRSPNGFRQNVGLHLASH 604 +D+ + +L + Y WK + PNG+ + + S+ Sbjct: 16 SDSQAQEKLKNIYSWKALEFAFPNGYAKLAAIKSGSY 52 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 21.4 bits (43), Expect = 9.6 Identities = 6/16 (37%), Positives = 8/16 (50%) Frame = -2 Query: 284 PIWATHVLTSREFFFP 237 P+W H+ R FP Sbjct: 634 PVWGRHIYDGRAMGFP 649 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.4 bits (43), Expect = 9.6 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +1 Query: 118 TGIIAVETVVPNLEEATNSA 177 T + A V P +EE TN+A Sbjct: 412 TALGAAALVAPGMEEPTNTA 431 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 21.4 bits (43), Expect = 9.6 Identities = 6/16 (37%), Positives = 8/16 (50%) Frame = -2 Query: 284 PIWATHVLTSREFFFP 237 P+W H+ R FP Sbjct: 634 PVWGRHIYDGRAMGFP 649 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 205,349 Number of Sequences: 438 Number of extensions: 4667 Number of successful extensions: 8 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24154023 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -