Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0439
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08) 182 2e-46
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 1e-39
SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 7e-26
SB_55149| Best HMM Match : Ldl_recept_a (HMM E-Value=2.6e-23) 38 0.007
SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_43823| Best HMM Match : MAM (HMM E-Value=0) 36 0.049
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 35 0.086
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26) 33 0.35
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25) 33 0.35
SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17) 32 0.61
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_18810| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_54789| Best HMM Match : Chitin_synth_1 (HMM E-Value=1.8) 31 1.1
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 31 1.4
SB_16706| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_10498| Best HMM Match : Ldl_recept_a (HMM E-Value=2.7e-07) 31 1.4
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.9
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34) 30 1.9
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_58897| Best HMM Match : Ion_trans_2 (HMM E-Value=4.8e-14) 29 4.3
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 4.3
SB_26236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_5319| Best HMM Match : Ldl_recept_a (HMM E-Value=7.56701e-44) 29 4.3
SB_44236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_19614| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_40871| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_23827| Best HMM Match : DUF809 (HMM E-Value=9.1) 28 7.5
SB_55663| Best HMM Match : Albicidin_res (HMM E-Value=0.53) 28 9.9
SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20) 28 9.9
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 28 9.9
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 28 9.9
>SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)
Length = 893
Score = 182 bits (444), Expect = 2e-46
Identities = 76/190 (40%), Positives = 118/190 (62%)
Frame = +2
Query: 74 APDCDPNQCVLPDCFCSADGTRIPGGIEPNQVPQMVTITFNGAVNVDNIDLYEQIFNGNR 253
A C P+ C LP+CFCS G +PGG+ P ++PQM+ +TF+ A+N +Y++IFNG +
Sbjct: 566 AERCHPDVCKLPNCFCS--GALVPGGLNPKEIPQMIMLTFDDAINGQVYPVYQKIFNGKK 623
Query: 254 HNPNGCQIKGTFFVSHKYTNYAAVQELHRKGHEISVFSITHKDDPQYWTSGSYDDWLAEM 433
NPNGC I+ TFFVSH+YT Y +Q L+ + HEI+ SI+H+ +W + + W E
Sbjct: 624 -NPNGCDIRATFFVSHEYTQYQLLQALYHERHEIADHSISHRLPIPWWKNATVKQWTDEA 682
Query: 434 AGARLIIERYANITDSSIIGVRAPYLRVGGNKQFEMMGDQYFVYDASITAPLGRVPIWPY 613
AG R I+ ++ + + G RAP+L++GG+ +F+ + D F Y+ S+ P+WPY
Sbjct: 683 AGMREILRKFGGVNAEDVKGFRAPFLQIGGDNEFKALHDNKFTYETSMPTQQNNPPLWPY 742
Query: 614 TLYFRMPHKC 643
TL + +C
Sbjct: 743 TLEYASTQEC 752
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 160 bits (388), Expect = 1e-39
Identities = 62/171 (36%), Positives = 109/171 (63%)
Frame = +2
Query: 131 GTRIPGGIEPNQVPQMVTITFNGAVNVDNIDLYEQIFNGNRHNPNGCQIKGTFFVSHKYT 310
G +P G++P Q+PQM+ +TF+ A+N+ Y+ + N + NPNGC ++ TFFVSH+YT
Sbjct: 1553 GASVPNGLDPKQIPQMIMLTFDDAINMQVFPFYQTLLNDTK-NPNGCNVRATFFVSHEYT 1611
Query: 311 NYAAVQELHRKGHEISVFSITHKDDPQYWTSGSYDDWLAEMAGARLIIERYANITDSSII 490
+Y + L+ + HEI+ +I+H+ ++W +Y DW +E+ G R I++ + + + +
Sbjct: 1612 DYQLLGTLYHERHEIADHTISHRTPIEWWKKATYQDWGSEIRGMRDILKEFGGVNEKDVR 1671
Query: 491 GVRAPYLRVGGNKQFEMMGDQYFVYDASITAPLGRVPIWPYTLYFRMPHKC 643
G RAP+L++GG+ QF+++ D F++D+S+ P+WPYTL + C
Sbjct: 1672 GFRAPFLQIGGDNQFKVLHDHSFMFDSSMPTWRTDPPLWPYTLDYSSAQDC 1722
>SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 114 bits (275), Expect = 7e-26
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = +2
Query: 68 NRAPDCDPNQCVLPDCFCSADGTRIPGGIEPNQVPQMVTITFNGAVNVDNIDLYEQIFNG 247
N A CD +C P+C CS D + PGG+ P PQ++ ITF+ + V N + Y+ G
Sbjct: 25 NVAEKCDLEKCQPPNCRCS-DDFQPPGGLSPALTPQIIMITFDDDITVINYEQYKDAVKG 83
Query: 248 NRHNPNGCQIKGTFFVSHKYTNYAAVQELHRKGHEISVFSITHKDDPQYWTSGSYDDW 421
NPNGC I TFF+SH YTNY ++LH +GHE++ ++TH+ YW +Y++W
Sbjct: 84 FT-NPNGCPITATFFISHNYTNYYLAEKLHSEGHELADHTVTHRTPTTYWEDATYEEW 140
>SB_55149| Best HMM Match : Ldl_recept_a (HMM E-Value=2.6e-23)
Length = 190
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIE 157
C+G+ DC D SDE C ++ +C+ NQCV C + PGG +
Sbjct: 110 CDGEMDCPDSSDEEGCVNRTCSSKEFNCN-NQCVPLSWKCDGEKDCRPGGFD 160
>SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 37.1 bits (82), Expect = 0.016
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNR 73
C+GKP+C D SDEN C ++P+R
Sbjct: 292 CDGKPECADHSDENDCPPLINPDR 315
>SB_43823| Best HMM Match : MAM (HMM E-Value=0)
Length = 1724
Score = 35.5 bits (78), Expect = 0.049
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDC 85
C+GKPDC D SDE C V NR C
Sbjct: 1363 CDGKPDCSDYSDEAHCRVRKSINRNVVC 1390
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLP 109
C+G PDC D SDE+ C PN DC+ Q P
Sbjct: 1323 CDGVPDCNDHSDEDDC-----PN--SDCNLEQIYCP 1351
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 34.7 bits (76), Expect = 0.086
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSAD 130
C+ + DC D SDE C PN C C+ C D
Sbjct: 2476 CDHQDDCGDGSDEQQCVNYTCPNHTFKCTSGHCIANSSVCDGD 2518
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSAD 130
C+G DC+D SDE C V C +C+ D C D
Sbjct: 3026 CDGIDDCRDGSDERNCHVTTCTADQFRCPSGRCISRDWLCDGD 3068
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSAD 130
C+ + DC D SDE C P C +CV D C +
Sbjct: 2228 CDRENDCGDNSDEARCPEVTCPAHEFTCPNGRCVSYDFLCDGE 2270
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFC 121
C+G+ DC D SDE C + C +C+ C
Sbjct: 3148 CDGESDCNDGSDEKGCPPKQCAKHQYRCASGRCISASWVC 3187
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDC-DPNQCVLPDCFC 121
C+G+ DC D SDE C +E N C + ++C+ C
Sbjct: 1107 CDGENDCGDRSDEVDCGLESCGNDRWRCSNTSRCIAKSQVC 1147
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 2 CNGKPDCKDESDE-NACTVEL-DPNRAPDCDPNQCV 103
C+G+ DC D SDE + C+ + DP C +C+
Sbjct: 66 CDGENDCGDMSDEPSNCSAHICDPKLEFQCANGRCI 101
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCV 103
C+G DC D SDE P R C + CV
Sbjct: 3226 CDGMMDCADASDEKGSGHRWCPQRLYQCINHVCV 3259
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 2 CNGKPDCKDESDENA--CTVELDPNRAPDCDPNQCVLPDCFCSAD 130
C+G DC D SDE A C V +A +C+ + C +
Sbjct: 3065 CDGDNDCGDSSDEKAGECHVTCPAGQARCATGRRCIPSEWRCDGE 3109
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
Frame = +2
Query: 2 CNGKPDCKDESDENA--CT 52
C+G+ DC+D SDEN+ CT
Sbjct: 3106 CDGESDCEDGSDENSAQCT 3124
>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
Length = 351
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIE 157
C+G C D SDE C + PD +CV P FC+ + G E
Sbjct: 57 CDGDYACVDHSDERNCACRSAEFKCPD---GKCVHPSKFCNGESDCTDGSDE 105
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIEP 160
CNG+ DC D SDE +C A C CV C+ G EP
Sbjct: 93 CNGESDCTDGSDEWSCDNSCSSRHA--CADGTCVTWSLTCNGVSDCQDGSDEP 143
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCV 103
CNG DC+D SDE + D R P P C+
Sbjct: 130 CNGVSDCQDGSDEPKLCGKHDTMRPPPW-PRPCI 162
>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
Length = 147
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIE 157
C+G C D SDE C + PD +CV P FC+ + G E
Sbjct: 57 CDGDYACVDHSDERNCACRSAEFKCPD---GKCVHPSKFCNGESDCTDGSDE 105
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIEP 160
CNG+ DC D SDE +C A C CV C+ G EP
Sbjct: 93 CNGESDCTDGSDEWSCDNSCSSRHA--CADGTCVTWSLTCNGVSDCQDGSDEP 143
>SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17)
Length = 1571
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTV-ELDPNRAPDCDPNQCVLPD 112
CNG+ DC+D SDE C + + AP + VL D
Sbjct: 746 CNGQMDCRDASDEQDCGIPTVTTTSAPQPTKGKTVLGD 783
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 31.9 bits (69), Expect = 0.61
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNR 73
C+G DC+D SDE C + L P R
Sbjct: 149 CDGASDCQDNSDEMNCPLTLAPGR 172
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 2 CNGKPDCKDESDENAC--TVELDPNRAPDCDPNQCVLPDCFCSAD 130
C+G+ DC D SDE+ C T N CD +C+ C +
Sbjct: 362 CDGENDCGDRSDESGCKPTTTCSANEF-RCDDGRCITSTFRCDRE 405
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAP-DCDPNQCVLPDCFCSADGTRIPG 148
C+G DC D SDE+ C P R P C P+ + C + R G
Sbjct: 320 CDGMDDCGDSSDEDNC-----PTRPPYTCPPSDFTCANSQCVPNSFRCDG 364
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 CNGKPDCKDESDENAC-TVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIEPNQVPQM 178
C+G+ DC D SDE C +P+ C +C+ C D G E N M
Sbjct: 606 CDGEDDCGDNSDEINCPKATCNPDTQFRCTNGRCIPRRWVCDKDDDCHDGSDERNSCATM 665
>SB_18810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVE 58
C+GKPDC D SDE C E
Sbjct: 66 CDGKPDCSDYSDEAHCRGE 84
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLP 109
C+G PDC D SDE+ C PN DC+ Q P
Sbjct: 26 CDGVPDCNDHSDEDDC-----PN--SDCNLEQIYCP 54
>SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSA-----DGTRIPG 148
C+G DCKD SDE+ C + + C CV C DGT PG
Sbjct: 1174 CDGTDDCKDASDESRCDHKCSKDEY-QCVSGACVKWPLTCDGKKDCEDGTDEPG 1226
>SB_54789| Best HMM Match : Chitin_synth_1 (HMM E-Value=1.8)
Length = 265
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 281 GTFFVSHKYTNYAAVQELHRKGHEISVFSITHKDDPQYWTSGSYD---DWLAEMAGARLI 451
G + +Y N A+ E+ K + THK DP + G +D +W + +
Sbjct: 39 GMSYFRWRYVNVCAILEVESKTLSALPYPKTHKSDPVAFIRGYHDYMTEWEPALEDVYKL 98
Query: 452 IERYANITDSSIIGV 496
+ NI D + + +
Sbjct: 99 MREPTNIKDPNAVAI 113
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 281 GTFFVSHKYTNYAAVQELHRKGHEISVFSITHKDDPQYWTSGSYD---DWLAEMAGARLI 451
G + +Y N A+ E+ K + THK DP + G ++ +W + +
Sbjct: 110 GMSYFRWRYVNVCAILEVESKTRSALPYPKTHKSDPVAFIRGYHEYMTEWEPALEDVYKL 169
Query: 452 IERYANITDSSIIGV 496
+ NI D + + +
Sbjct: 170 MREPTNIKDPTAVAI 184
>SB_16706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 281 GTFFVSHKYTNYAAVQELHRKGHEISVFSITHKDDPQYWTSGSYD---DWLAEMAGARLI 451
G + +Y N A+ E+ K + THK DP + G ++ +W + +
Sbjct: 39 GMSYFRWRYVNVCAILEVESKTRSALPYPKTHKSDPVAFIRGYHEYMTEWEPALEDVYKL 98
Query: 452 IERYANITDSSIIGV 496
+ NI D + + +
Sbjct: 99 MREPTNIKDPNAVAI 113
>SB_10498| Best HMM Match : Ldl_recept_a (HMM E-Value=2.7e-07)
Length = 106
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 2 CNGKPDCKDESDENAC 49
CNGK DC D SDE C
Sbjct: 23 CNGKIDCPDASDEKGC 38
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDP 67
C+G+ DC D SDE C+ +P
Sbjct: 243 CDGQDDCNDGSDEKNCSASANP 264
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 CNGKPD-CKDESDENACTVELDPNRAPDCDPNQCVLPDCFC 121
CNG D C D SDE+ CT L + C +C+ FC
Sbjct: 678 CNGMRDSCVDGSDESGCTCGLHEFQ---CSSGECIEVATFC 715
>SB_47789| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-34)
Length = 262
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFCSAD 130
C+ DC D SDEN C CD +C+ C D
Sbjct: 207 CDHDNDCGDNSDENNCPYSTCNPSQFKCDNGRCISSKWRCDHD 249
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDCDPNQCVLPDCFC 121
C+G DC D+SDE C N+ CD QC+ D C
Sbjct: 1328 CDGMLDCTDKSDEEDCP-PCKENQF-RCDNGQCIDGDPRC 1365
>SB_58897| Best HMM Match : Ion_trans_2 (HMM E-Value=4.8e-14)
Length = 510
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 680 PVWEMVMNELDRRDDPTFDESLPGCHVV-DSCSN 778
P+ + NELD DDPTFD H+V DS N
Sbjct: 106 PITSALENELDDGDDPTFDYYQKHPHLVFDSLVN 139
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAP 79
C+G+ DC D SDE C+ P P
Sbjct: 168 CDGQNDCGDWSDETGCSTPPIPTTCP 193
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDP 67
C+G DC D SDE +C P
Sbjct: 122 CDGVDDCGDSSDEMSCNATATP 143
>SB_26236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 26 DESDENACTVELDPNRAPDCDPNQCV 103
D+ D+ C +P++ PD D ++CV
Sbjct: 410 DQGDQGECVTVPEPDQVPDSDRDECV 435
>SB_5319| Best HMM Match : Ldl_recept_a (HMM E-Value=7.56701e-44)
Length = 212
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVELDPNRAPDC-DPNQCVLPDCFC 121
C+G+ DC D SDE C +E N C + ++C+ C
Sbjct: 134 CDGENDCGDRSDEVDCGLESCGNDRWRCSNTSRCIAKSQVC 174
>SB_44236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 209 VDNIDLYEQIFNGNRHNPNGCQIKGTFFVSHKYTNYAAVQELHRKGHE 352
VD LY F +H N +I + H Y N +LH G++
Sbjct: 337 VDTRLLYLAAFPSAKHQQNLARILNELHIKHDYNNNFLSDQLHNAGND 384
>SB_19614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 2 CNGKPDCKDESDENACTVE 58
CN + DC+D SDE +C E
Sbjct: 411 CNNRQDCRDGSDEISCPPE 429
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 137 RIPGGIEPNQVPQMVTITFNGAVNVDNIDLYEQIFNG 247
++ G +E + VT +NG N D D YE+ ++G
Sbjct: 641 KVSGWLETSVTSTSVTADWNGDSNADQEDYYEEAWDG 677
>SB_40871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 2 CNGKPDCKDESDENAC 49
C+G+ DC+D SDE C
Sbjct: 100 CDGENDCRDGSDETGC 115
>SB_23827| Best HMM Match : DUF809 (HMM E-Value=9.1)
Length = 159
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 603 YGLTHCISACHISVTATPTTVRLEVTPF 686
Y +T+C++ H++ TP V VTP+
Sbjct: 47 YHVTYCVTPYHVTYCVTPYHVTYYVTPY 74
>SB_55663| Best HMM Match : Albicidin_res (HMM E-Value=0.53)
Length = 198
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 275 IKGTFFVSHKYTNYAAVQELHRKGHEISVFSITHKDDPQYWTSGSYD---DWLAEMAGAR 445
+ GT V Y + A+ ++ K THK DP + G ++ +W +
Sbjct: 15 VNGTSLVGADYQSVCAILKVESKTRSALPNPKTHKSDPVAFIRGYHEYMTEWEPALEDVY 74
Query: 446 LIIERYANITDSSIIGV 496
++ NI D + + +
Sbjct: 75 KLMREPTNIKDPNAVAI 91
>SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20)
Length = 772
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 2 CNGKPDCKDESDENAC 49
C+GK DC D +DE C
Sbjct: 146 CDGKKDCTDNTDEKNC 161
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 2 CNGKPDCKDESDENACT 52
C+G DC D SDE CT
Sbjct: 42 CDGSEDCADSSDEINCT 58
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 571 IHHCSSWTRPDMALHIVFPHA 633
+H + W+R D+ALH V+ H+
Sbjct: 707 VHRATLWSRLDLALHTVYWHS 727
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,904,194
Number of Sequences: 59808
Number of extensions: 615320
Number of successful extensions: 1530
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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