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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0439
         (788 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g27760.1 68417.m03988 oxidoreductase, forever young (FEY3) id...    29   4.6  
At3g53540.1 68416.m05912 expressed protein                             28   6.1  

>At4g27760.1 68417.m03988 oxidoreductase, forever young (FEY3)
           identical to forever young (FEY3) oxidoreductase from
           GI:12004621 [Arabidopsis thaliana]
          Length = 374

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 338 RKGHEISVFSITHKDDPQYWTSGSYDDW 421
           ++G   S+FS T    P+YW +   DDW
Sbjct: 286 QEGCRSSLFSATDPQIPEYWETLKNDDW 313


>At3g53540.1 68416.m05912 expressed protein
          Length = 924

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 626 RMPHKCNGNAHNCPSRSH 679
           R PH+  G    CPSRSH
Sbjct: 266 RSPHRNGGGGSGCPSRSH 283


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,442,924
Number of Sequences: 28952
Number of extensions: 412530
Number of successful extensions: 1000
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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