BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0439 (788 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g27760.1 68417.m03988 oxidoreductase, forever young (FEY3) id... 29 4.6 At3g53540.1 68416.m05912 expressed protein 28 6.1 >At4g27760.1 68417.m03988 oxidoreductase, forever young (FEY3) identical to forever young (FEY3) oxidoreductase from GI:12004621 [Arabidopsis thaliana] Length = 374 Score = 28.7 bits (61), Expect = 4.6 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 338 RKGHEISVFSITHKDDPQYWTSGSYDDW 421 ++G S+FS T P+YW + DDW Sbjct: 286 QEGCRSSLFSATDPQIPEYWETLKNDDW 313 >At3g53540.1 68416.m05912 expressed protein Length = 924 Score = 28.3 bits (60), Expect = 6.1 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 626 RMPHKCNGNAHNCPSRSH 679 R PH+ G CPSRSH Sbjct: 266 RSPHRNGGGGSGCPSRSH 283 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,442,924 Number of Sequences: 28952 Number of extensions: 412530 Number of successful extensions: 1000 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 963 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1000 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1775300800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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