Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0438
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       26   0.41 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   3.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   6.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.8  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 493 NATNKQIVNFSQYCNFCTF*AIIYILSYNY 404
           N  NK+  N  QYCN     A++Y +   Y
Sbjct: 463 NNNNKEEGNSCQYCNIAFGDAVLYTIHMGY 492


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 713 QHYKQPINKSLMLQTNRSSTFSVLQCFWTFFYV 615
           QH +     +     +RS+ FSVL    TF  V
Sbjct: 212 QHNRPEFKAARFFSIDRSTLFSVLNSLTTFLLV 244


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 398 SSNPMHFKIDSMLVFKIVSYSLSMYC 321
           S + M+F++    VF ++ YSL   C
Sbjct: 217 SGDEMYFRVAFPSVFTLIDYSLWKAC 242


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 575 KMWDSPQTYNL*ITHKKMSKSIAVL 649
           K+WD  Q  +L   +KK  K I V+
Sbjct: 397 KLWDMFQNESLTRLYKKAGKEIPVI 421


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 587 NPTFFLISCNFQNHLL 540
           NP F+L  C+F  H++
Sbjct: 663 NPGFWLFHCHFLFHIV 678


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,588
Number of Sequences: 336
Number of extensions: 4011
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)