Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0433
(723 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434... 56 4e-08
03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692... 55 7e-08
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 54 1e-07
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 31 1.2
04_04_0416 + 25042937-25043350,25044038-25044238,25044343-250445... 29 3.7
07_01_0702 + 5288588-5288889,5289257-5289407,5289543-5289725,529... 29 4.9
05_01_0089 + 589457-589506,589598-589741,589820-589903,590118-59... 29 4.9
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 28 6.5
08_02_0138 - 13052183-13052784,13053019-13053337 28 8.6
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885... 28 8.6
03_06_0459 + 34085134-34086269,34086471-34086717 28 8.6
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 28 8.6
>07_01_0584 +
4345134-4345237,4346165-4346267,4346397-4346466,
4346552-4346590,4346684-4346801,4346894-4346951,
4347031-4347095,4347281-4347341,4347678-4347779,
4348005-4348070,4348399-4348443,4348540-4348797,
4349289-4349501,4350103-4350411,4350461-4350613
Length = 587
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 71 ERETTGLLLWSQPFKATLANGEKVVIFLMDTQGTFDS--QSTVRDNATVFALSTLISSVQ 244
+ +T G+ +W P + + NG KV + +DT+G F+S +S V D+ +FAL+T++SS+
Sbjct: 101 DTKTKGIWVWGTPIELDV-NGSKVSVLYLDTEG-FESIGKSNVYDDR-IFALATVLSSIL 157
Query: 245 IYNLSQNIEEDDLQHLQLFTDYGQ 316
IYNL + I E D+ L + +
Sbjct: 158 IYNLPETIREADISRLSFAVEIAE 181
>03_06_0300 +
32967935-32968029,32968975-32969077,32969175-32969244,
32969464-32969581,32969687-32969744,32969831-32969895,
32969990-32969996,32970087-32970147,32970757-32970776,
32970858-32970923,32971126-32971293,32971372-32971629,
32972098-32972310,32972824-32973099
Length = 525
Score = 54.8 bits (126), Expect = 7e-08
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Frame = +2
Query: 86 GLLLWSQPFKATLANGEKVVIFLMDTQGTFDS--QSTVRDNATVFALSTLISSVQIYNLS 259
G+ +W P + + +G KV + +DT+G F+S +S V D+ +FAL+T++SSV IYNL
Sbjct: 90 GIWIWGTPVEMDI-DGSKVSVLYLDTEG-FESVGKSNVYDDR-IFALATVLSSVLIYNLP 146
Query: 260 QNIEEDDLQHLQLFTD-----YGQLAQESSSGRPFQRLQFLVRDW 379
+ + E D+ L + YG++ + + P + L + RD+
Sbjct: 147 ETVREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDF 191
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = +2
Query: 80 TTGLLLWSQPFKATLANGEKVVIFLMDTQGTFDSQSTVRDNATVFALSTLISSVQIYNLS 259
T GL +WS P K T +G + + L+DT+G T + +F+L+ L+SS+ IYN
Sbjct: 101 TKGLWMWSAPLKRTGLDGTEYNLVLLDTEGIDAYDQTGTYSIQIFSLAVLLSSMFIYNQM 160
Query: 260 QNIEEDDLQHLQLFTDYGQLAQESSSG 340
I+E L L L T+ + + +SG
Sbjct: 161 GGIDEAALDRLSLVTEMTKHIRVRASG 187
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 242 QIYNLSQNIEEDDLQ-HLQLFTDYGQLAQESSSGRPFQRLQ 361
Q + L Q +++ LQ H+QL T L Q+ S G P Q+ Q
Sbjct: 686 QQHQLQQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQQQQ 726
>04_04_0416 + 25042937-25043350,25044038-25044238,25044343-25044525,
25044975-25045084,25045317-25045376,25045620-25045911,
25046780-25046967,25047275-25048149,25048846-25049805,
25050025-25050068,25050860-25050925,25051176-25051364
Length = 1193
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 304 GLRSASTREQFRKALPEAAVSGSRLELPVRPSVWRSGRSTASEETAPDS*RTASRAS 474
G R+A+ E+ KA A+++ ++ V+ W SGR+++ E D+ +TA +AS
Sbjct: 944 GSRAATLAEKNAKAELNASINNLISKIKVK---WHSGRNSSGELNIKDAIQTALQAS 997
>07_01_0702 +
5288588-5288889,5289257-5289407,5289543-5289725,
5290063-5290137,5290248-5290403,5290502-5290597,
5290855-5290985,5291057-5291138,5291237-5291586,
5293029-5293234,5293254-5293570
Length = 682
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 533 EASGSKRSHQISLLRTL*GS---EALDAVLHESGAVSSEAVDRPERHTDGRTGSSSLEPE 363
E G +RS++I++ T GS AL A + A + + R + T G+ ++ P
Sbjct: 468 ELLGPERSNRIAIEHTKDGSGIGAALLAAANSKYAAAQISTSRSSQQTVGQQATNWQNPR 527
Query: 362 TAASGR 345
TAAS R
Sbjct: 528 TAASRR 533
>05_01_0089 +
589457-589506,589598-589741,589820-589903,590118-590261,
590351-590401,590492-590641,591175-591488,592685-592815,
593131-593451,594994-595057,595322-595443
Length = 524
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +2
Query: 32 DEPLEGFKWRGGSERETTGLLLWSQPFKATLANGEKVVIFLMDTQGTFD---SQSTVRDN 202
DE GF+ TG L S F A + + E + ++ + D S ST+ ++
Sbjct: 70 DEKRTGFQMSNNESSADTGNPLQSSNFTAEVNSTELARLSRLNRKRKLDLRRSGSTLNNS 129
Query: 203 ATVF--ALSTLISSVQIYNL-SQNIEEDDLQHLQLFTDYGQLAQESSSGRPFQRLQFLVR 373
+T A T S + Y + S N+E + L+ + G + + + P ++ + V+
Sbjct: 130 STCSNPANHTERSRKEKYQIPSTNMETNSLKMNDRVSKEGNITRNKVAVPPRKKKKSSVK 189
Query: 374 DWSF 385
+W+F
Sbjct: 190 EWNF 193
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 122 LANGEKVVIFLMDTQGTFDSQSTVRDNATVFALSTLISSVQIYNLSQNIEE 274
L + K IF++ + FD+ VRD AT++ L TL V + + ++++E
Sbjct: 446 LVDALKPRIFVLLRRCLFDTDDEVRDRATLY-LQTLDGEVAVGSTEKDVKE 495
>08_02_0138 - 13052183-13052784,13053019-13053337
Length = 306
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 415 RSTASEETAPDS*RTASRASEPQRVRNKDI**DRLLPDASSGPQGRYEP*LQRETSRYQS 594
RS++S+E +P+ A++P+R+ ++ RLL S PQ P + + +R+
Sbjct: 109 RSSSSQEASPNDTAEIEEAAQPERIVPQEYCDARLL----SFPQRHKRPLVDEQFARFLE 164
Query: 595 RIQR 606
IQ+
Sbjct: 165 VIQK 168
>05_07_0328 + 29286109-29286120,29286982-29287146,29288427-29288589,
29288625-29288903,29289047-29289122,29289725-29289787,
29292116-29292164,29292413-29292504,29293017-29293068,
29293209-29293271,29293382-29293431,29293941-29294016,
29294444-29294656,29294763-29294869,29294966-29295074,
29295489-29295689,29295773-29296033,29296154-29296171,
29296287-29296397,29296755-29297030,29297108-29297382,
29297814-29298165,29298371-29298655,29298715-29299261,
29301658-29301781,29301871-29301946,29302062-29302136,
29302300-29302353,29302833-29302892,29302977-29303093,
29303228-29303361,29303480-29303682,29303879-29303976,
29304358-29304461,29304537-29304702,29304803-29304925,
29305047-29305129,29305217-29305358,29305523-29305549,
29305784-29305854,29305930-29306518
Length = 2046
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 487 LSEVLKLWM-LSFMNLEPFLQKLLTAQSAIRMVVREAPVSNQKLQPLEGP 341
+ EV K+ + L F+N+ P L+ + +R +V E P ++K + + P
Sbjct: 1293 MEEVAKVSLFLLFLNVVPSLRDKAQVEQLLRYIVEEVPEDSEKKRSFKFP 1342
>03_06_0459 + 34085134-34086269,34086471-34086717
Length = 460
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 53 KWRGGSERETTGLLLWSQPF 112
+WRGG E G L WS P+
Sbjct: 440 RWRGGEEEVGGGALAWSPPW 459
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 2 ESGGEWIGVEDEPLEGFKWRGGS-ERETTGLLLWSQPFKATLANGEK 139
E+ E + ++DE LE F+WR S + E + L Q +A L+ E+
Sbjct: 419 EAFTEQLRLKDEKLEAFRWRAASMDAEASRLRSRLQELEARLSEQEQ 465
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,813,636
Number of Sequences: 37544
Number of extensions: 417699
Number of successful extensions: 1378
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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