Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0433
         (723 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37041| Best HMM Match : GBP (HMM E-Value=0)                        222   3e-58
SB_36132| Best HMM Match : GBP (HMM E-Value=8.7e-28)                   62   4e-10
SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31)                      46   3e-05
SB_9615| Best HMM Match : GBP (HMM E-Value=2.8e-22)                    46   3e-05
SB_47641| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.31 
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_41081| Best HMM Match : DUF1014 (HMM E-Value=2.9)                   29   2.9  
SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)            29   3.8  
SB_26414| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  
SB_44172| Best HMM Match : Pkinase_Tyr (HMM E-Value=6.3e-20)           28   6.7  
SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026)                 28   6.7  
SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013)                 28   8.8  
SB_8290| Best HMM Match : WD40 (HMM E-Value=2)                         28   8.8  

>SB_37041| Best HMM Match : GBP (HMM E-Value=0)
          Length = 466

 Score =  222 bits (542), Expect = 3e-58
 Identities = 111/249 (44%), Positives = 156/249 (62%), Gaps = 19/249 (7%)
 Frame = +2

Query: 2   ESGGEWIGVEDEPLEGFKWRGGSERETTGLLLWSQPFKATLANGEKVVIFLMDTQGTFDS 181
           +S  +W+G E E LEGF WRGGSER+TTG+L+W++P+     +GE+VV+ LMDTQG FDS
Sbjct: 1   DSCDDWLGGETEALEGFSWRGGSERDTTGILMWNKPYICKRPDGEEVVVLLMDTQGAFDS 60

Query: 182 QSTVRDNATVFALSTLISSVQIYNLSQNI--EEDDLQHLQLFTDYGQLA----------- 322
            STV+D AT+FALST+ SS Q++     +  E ++++  Q+  +                
Sbjct: 61  SSTVKDCATIFALSTMTSSTQLFTEYGKLAMENNEIKPFQVNNEIKPFLLNNEIKPFQVN 120

Query: 323 ------QESSSGRPFQRLQFLVRDWSFPYDHPYGAXXXXXXXXXXXXIHEGQHPELQNLR 484
                 QE+   +PFQRL FLVRDWSFPY+  YG               E QH EL  +R
Sbjct: 121 NEIKPFQENKEIKPFQRLLFLVRDWSFPYEANYGEAGGSQILERRLKTTERQHSELLQVR 180

Query: 485 EYVTRIFDEIACFLMPHPGLKVATNPDFNGKLADISPEFKDSLKQLLPMLLAPENLVPEA 664
           +++   F++I CFLMPHPGL+VATNP F+G+L DI  EFK++L++L+P LLAPENL  + 
Sbjct: 181 KHIKECFEKIGCFLMPHPGLRVATNPTFDGRLVDIDDEFKENLRKLIPSLLAPENLELKG 240

Query: 665 DRSQKVKAK 691
              ++V  +
Sbjct: 241 INGEEVTCR 249


>SB_36132| Best HMM Match : GBP (HMM E-Value=8.7e-28)
          Length = 368

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 29/81 (35%), Positives = 51/81 (62%)
 Frame = +2

Query: 77  ETTGLLLWSQPFKATLANGEKVVIFLMDTQGTFDSQSTVRDNATVFALSTLISSVQIYNL 256
           ET G+ +W +P K  L +G++V +  +DT+G   +  +   +A VFA++TL+SS  IYN 
Sbjct: 154 ETMGIWMWGKPLKIKLQDGQEVALVFLDTEGFAATNVSESYDAKVFAVATLLSSYLIYNS 213

Query: 257 SQNIEEDDLQHLQLFTDYGQL 319
            + I++ D+ +L+L +   QL
Sbjct: 214 VKIIDQGDIDYLELLSRRTQL 234


>SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31)
          Length = 708

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = +2

Query: 77  ETTGLLLWSQPFKATLANGEKVVIFLMDTQGTFDSQSTVRDNATVFALSTLISSVQIYN 253
           ET G+ L+    K   ANG +V + L+D++G   + +   D+ +VF LS L+SSV IYN
Sbjct: 86  ETMGIWLYVVDQKFKDANGREVTVVLLDSEGINATGAQKSDDHSVFTLSVLLSSVMIYN 144


>SB_9615| Best HMM Match : GBP (HMM E-Value=2.8e-22)
          Length = 621

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 25/72 (34%), Positives = 39/72 (54%)
 Frame = +2

Query: 77  ETTGLLLWSQPFKATLANGEKVVIFLMDTQGTFDSQSTVRDNATVFALSTLISSVQIYNL 256
           +T GL LW  P +     G+   + L+D++GT  SQS  +++  +  L+ L+SSV IYN 
Sbjct: 184 KTMGLWLWVVPKQFRDDKGQPFTVVLVDSEGTKASQSQQKEDDVIVTLTLLLSSVLIYNS 243

Query: 257 SQNIEEDDLQHL 292
                  DL+ L
Sbjct: 244 EGVPTASDLEQL 255


>SB_47641| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = -2

Query: 452 HESGAVSSEAVDRPERHTD-GRTGSSSLEPETAASGRAFRNCSLVLADRSP*TTANAVSR 276
           HE  A  S  V  PERHTD G +     +    A    +RN   VL    P    N  ++
Sbjct: 118 HEEAAADSPVVCLPERHTDSGESAIPDSQVVDTACQHKWRNLKEVLVPSLPERQRNLTNK 177

Query: 275 LL 270
           LL
Sbjct: 178 LL 179


>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1067

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/32 (50%), Positives = 16/32 (50%)
 Frame = -1

Query: 96  SSKPVVSLSDPPRHLKPSKGSSSTPIHSPPLS 1
           SS P V  S PP    PS  S S P  SPP S
Sbjct: 148 SSFPSVPPSSPPSSSSPSSSSPSVPPSSPPSS 179


>SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 914

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 24/94 (25%), Positives = 37/94 (39%)
 Frame = +1

Query: 148 ISDGYARNVRQSVHCARQRHSVRSLHADIFRSNLQLVAEH*RRRLTAFAVVHGLRSASTR 327
           +SD    N R+    +R R S      D   + +Q  A   RRR  +        +  TR
Sbjct: 660 LSDNSPINQRKEQEVSRARSSSTCYTEDAILAAMQHTAVE-RRRTCSPVTTCAQYTRKTR 718

Query: 328 EQFRKALPEAAVSGSRLELPVRPSVWRSGRSTAS 429
           E+F   +P+  +S  R    ++ S    G  T S
Sbjct: 719 EKFSPDIPDLVISSQRTNTLMQGSTDALGTGTLS 752


>SB_41081| Best HMM Match : DUF1014 (HMM E-Value=2.9)
          Length = 340

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +1

Query: 286 AFAVVHGLRSASTREQFRKALPEAAVSGSRLELPVRPSVWRSGRSTASEETAPDS*RTAS 465
           +F V   +RSA   E+ RKA   + + G   +  V+P      ++ A +   PD+ ++ +
Sbjct: 161 SFRVKEFVRSAEESERERKAKDRSGICGQGSDALVKPQEENLRKAGAIKGAGPDAIKSGA 220

Query: 466 RASEPQRV 489
           R+     V
Sbjct: 221 RSDSDDEV 228


>SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)
          Length = 216

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = +2

Query: 452 EGQHPELQNLREYVTRIFDEIACFLMPHPGLKV-ATNPDFNGKLADISPEFKDSLKQLLP 628
           EG+  ++ +L++YV  IFD I   +  + GL +        G +A ++ + + +  + + 
Sbjct: 36  EGERAQIDSLQKYVRDIFDHIDQIIPKYEGLPIYLFGHSMGGLIAVLAAQRRPTFFKGV- 94

Query: 629 MLLAPENLV-PEADRSQKVKA 688
           +L AP  +V P  D    VKA
Sbjct: 95  VLSAPALIVDPHKDNKCMVKA 115


>SB_26414| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 215

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 476 SEALDAVLHESGAVSSEAVDRPERHTDGRTGSSSLEPETAASGRAFRNC 330
           S+ +   +  + A  + A  RP++H  GRTG SS      A+ R+ R+C
Sbjct: 90  SDVISGDISSAHAEETGATSRPKQH--GRTGDSSTGAPLQAAIRSDRHC 136


>SB_44172| Best HMM Match : Pkinase_Tyr (HMM E-Value=6.3e-20)
          Length = 637

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = +2

Query: 92  LLWSQPFKATLANGEKVVIFLMDTQGTFDSQSTVRDNATV 211
           ++W+ P K+TLA  +K+   ++D +   ++ S + +N T+
Sbjct: 82  IIWTLPDKSTLALNDKLHRIVIDEETKRENDSVITNNETL 121


>SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 651

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 177 TVSPLCETTPQCSLSPR*YLPFKFTTCRRTLKKTTYSICS 296
           T++ +CE TP  SLS   Y  +   +  R +++  +S CS
Sbjct: 534 TIAEVCEVTPLISLSAMRYCCWPQMSQSRMVRQLAFSACS 573


>SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026)
          Length = 1532

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 449  ESGAVSSEAVDRPERHTDGRTGSSSLEP 366
            E  A  S AV  PERHTD  +GS+S +P
Sbjct: 1182 EVAAADSPAVCLPERHTD--SGSTSAQP 1207


>SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 315

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 114 LKGCDHSSKPVVSLSDPPRHLKPSKGSSSTPIHSPPL 4
           L+G    S  + SL  P    + S GS STP+HS P+
Sbjct: 275 LRGSPRGSNRISSLGSPGS--RSSLGSISTPLHSHPI 309


>SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013)
          Length = 1124

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = -2

Query: 452 HESGAVSSEAVDRPERHTD-GRTGSSSLEPETAASGRAFRNCSLVLADRSP*TTANAVSR 276
           HE  A  S  V  PERHTD G +          A    +RN   V     P    N  ++
Sbjct: 737 HEVAAADSPVVCLPERHTDSGESAIPDNHVVDTACQHKWRNLKEVPVPSLPERQRNLTNK 796

Query: 275 LL 270
           LL
Sbjct: 797 LL 798


>SB_8290| Best HMM Match : WD40 (HMM E-Value=2)
          Length = 233

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = -2

Query: 314 DRSP*TTANAVSRL----LQCSATSCKFERKISAWRERTLWRCLAQWTDCRTFLAYPSEI 147
           DR+   TA  + RL    ++C  T C F    S  ++  +      WT     L YP  I
Sbjct: 34  DRTVKVTARLLGRLTFTVVKCDQTFCLF---YSRKKKAPVIAVFGHWTAVTANLPYPKTI 90

Query: 146 SPPFR 132
            P FR
Sbjct: 91  RPEFR 95


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,471,504
Number of Sequences: 59808
Number of extensions: 472085
Number of successful extensions: 1501
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)