Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0433
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 411 RAPYGWSYGKLQSRTRNCSLWKGLPELLSC 322
           R P    Y +++  TR+CSL+ G    LSC
Sbjct: 80  RGPANRMYIEIKFTTRDCSLFPG--NALSC 107


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 335 SGRPFQRLQFLVRDWSFPYDHP 400
           +G P  R+Q+L  D +  +D P
Sbjct: 426 AGEPLPRVQWLKNDEALNHDQP 447


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 414 PRAPYGWSYGKLQSRTRNCSLWK 346
           P     W+ G+L++   NC+  K
Sbjct: 516 PNYSVNWTIGQLEAEVINCTTGK 538


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 301 EQLQML*VVFFNVLRQVVNLNGRYQRGESE 212
           E +Q   V FF++LR      G Y+    E
Sbjct: 385 ELMQETHVCFFSLLRDAFTSKGEYRMSTGE 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,357
Number of Sequences: 438
Number of extensions: 4032
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)