Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0430
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine rece...    31   1.3  
U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical p...    28   6.7  
AF068713-10|AAC17801.1|  376|Caenorhabditis elegans Serpentine r...    28   8.9  

>U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine
           receptor, class u protein7 protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 757 NVLLFFFNKNSYKVPSL*LTEAACRLTNYEQFFIF*LKQRL*LFILAVLIP 605
           N+L FFF+  S + P+  +  + C  +N+E   IF L     L  LA+  P
Sbjct: 75  NILSFFFDYMSNRFPATGMMTSWCASSNHETLLIFILTSHFYLDYLAMGFP 125


>U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical
           protein ZK1248.1 protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 42  SELKWHKFSKYKRTHRKYERFGLEDVFTFCD 134
           S+LK    +KY++ H K+++F  ED F   +
Sbjct: 64  SKLKAGMVAKYRKKHPKFDKFKGEDAFAIAE 94


>AF068713-10|AAC17801.1|  376|Caenorhabditis elegans Serpentine
           receptor, class w protein130 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 570 STNTFLNIRSFFGIKTARINNYSRC 644
           S + F++I  FFG K A   NYS C
Sbjct: 171 SISLFMDILDFFGYKIASQKNYSPC 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,161,724
Number of Sequences: 27780
Number of extensions: 278157
Number of successful extensions: 598
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)