Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0429
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_2334| Best HMM Match : p450 (HMM E-Value=0) 43 2e-04
SB_15097| Best HMM Match : p450 (HMM E-Value=0) 32 0.52
SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_57256| Best HMM Match : Cation_ATPase_C (HMM E-Value=3.2) 31 0.91
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 28 6.4
SB_36903| Best HMM Match : p450 (HMM E-Value=0) 28 6.4
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 8/193 (4%)
Frame = +3
Query: 87 SEVLW--CLLMLCACVWWWCSAPRRT-RKLLAALPSFPQLPLLGNIHQIPRNSINLFQFL 257
+ +LW +L++ +WW+ R R L +P LG + + ++S + L
Sbjct: 20 TSLLWGAVVLVVIKIIWWYGQKTERAIRNTFPHLRGPKPVPFLGFLPEFAKHSNGIHLLL 79
Query: 258 EKIAVTCDTTEMPFVFWLGPRPILFISDPEDVKGVN----NAFIEKPHYYSFAKVWLGNG 425
+K F G +P L + DP+ ++ + + F ++P + + L +
Sbjct: 80 DKYYKLYGRV-FTMAFARG-KPALVVCDPKMLREIFVKNFDCFYDRPVPFELPEP-LDSF 136
Query: 426 LVVAPPEIWKNSIKKLSGTFTPSIVEGYQEVFAGRAADLVQRL-KARTTEEPFDIMHDLA 602
L + E WK LS TFT ++ + L++++ KA T E FDI+
Sbjct: 137 LSIVRGERWKRIRNTLSPTFTAHNMKSMVPLINVPCDTLMKKIEKAAETGETFDIVKYQQ 196
Query: 603 YTTLEAICQTAFG 641
T+E I FG
Sbjct: 197 AVTVEIILSIVFG 209
>SB_2334| Best HMM Match : p450 (HMM E-Value=0)
Length = 498
Score = 43.2 bits (97), Expect = 2e-04
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 6/195 (3%)
Frame = +3
Query: 105 LLMLCACVWWWCSAPRRTRKLLAALPSFPQLPLLGNIHQIPR-NSINLFQFLEKIAVTCD 281
LL+ A ++W + R K L +P P LP +GN+ I R I++ + + +
Sbjct: 21 LLIALAVIYWVGVSSFRVLKGLN-IPGPPPLPYIGNLRDIQRLGGIHV----APVRLMQE 75
Query: 282 TTEMPFVFWLGPRPILFISDPEDVKGVN----NAFIEKPHYYSFAKVWLGNGLVVAPPEI 449
++ F + +G P + + DPE +K V F + + + + +G+ A +
Sbjct: 76 YGKV-FAWSVGRTPAIVVGDPEILKHVMVKEFQNFRNRFVVFKDIRSEMRHGMFSATDDN 134
Query: 450 WKNSIKKLSGTFTPSIVEGYQEVFAGRAADLVQRL-KARTTEEPFDIMHDLAYTTLEAIC 626
WK L+ TFT + L+ ++ K T E DI+ + +LE I
Sbjct: 135 WKRIRSTLTPTFTSGKLRQMTPKMRESCDTLMDKIGKVADTGESVDILGMFSPMSLEIIL 194
Query: 627 QTAFGFPKIFREHRN 671
TAFG +++ N
Sbjct: 195 STAFGIDSQVQKNPN 209
>SB_15097| Best HMM Match : p450 (HMM E-Value=0)
Length = 1310
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 540 LVQRLKARTTEEPFDIMHDLAYTTLEAICQTAFG 641
L++RLKA P D HDL T L IC FG
Sbjct: 601 LIKRLKA-ANGNPIDPKHDLFLTILNVICNMVFG 633
>SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.5 bits (68), Expect = 0.69
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Frame = +3
Query: 300 VFWLGPRPILFISDPEDVKGV-------NNAFIEKPHYYSFAKVWLGNGLVVAP-PEIWK 455
VFW P++F+ PE VK V + + + + + + G G++ P P W
Sbjct: 81 VFWAFHNPVVFVVSPEMVKKVLVTYDLPKSTRVYEKLQFVYNQRCTGRGILTEPDPSAWH 140
Query: 456 NSIKKLSGTFTPSIVEGYQEVFAGRAADLVQRLKARTT-EEPFDIMHDLAYTTLEAICQT 632
L+ F + F ++ +L + + D+ +L+ TTL+ I +
Sbjct: 141 KKRTLLNPAFHRKNLMNLMSPFNVICERMIDKLSLISDGKTQVDLADELSRTTLDVIGKV 200
Query: 633 AF 638
AF
Sbjct: 201 AF 202
>SB_57256| Best HMM Match : Cation_ATPase_C (HMM E-Value=3.2)
Length = 450
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 36 KFTLCSSGFRILSMLIMSEVLWCLLMLCACVWWWC-SAPRRTRKLLAALPSFPQLPLLGN 212
+FT C S F L +L+ + C + CA V+W S P T P++PL+
Sbjct: 87 RFTSCHSTFTAL-ILLAQVLALCEYIYCADVYWHAFSGPNHTGNTTEPPTGSPKIPLITL 145
Query: 213 IHQI 224
+ +I
Sbjct: 146 VVEI 149
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 461 HQEVVGHIHAEYSGRIPGSLRRARSRPRPETEGSYYGG 574
H+E G+ E S P +R R P TEG YGG
Sbjct: 1034 HEEEKGNQKQEASPHPPRGRKRKRPTPTTTTEGCVYGG 1071
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/69 (21%), Positives = 31/69 (44%)
Frame = +3
Query: 378 EKPHYYSFAKVWLGNGLVVAPPEIWKNSIKKLSGTFTPSIVEGYQEVFAGRAADLVQRLK 557
E+ YY A +W + V ++W +++ SG ++ + ++ + +LV K
Sbjct: 730 ERLFYYQLALIWQVILVPVIKSDVWPLLLQEESGQVLMMTIKAFHQIMRCVSTNLVTVTK 789
Query: 558 ARTTEEPFD 584
+ PFD
Sbjct: 790 MVSDMLPFD 798
>SB_36903| Best HMM Match : p450 (HMM E-Value=0)
Length = 644
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 537 DLVQRLKARTTEEPFDIMHDLAYTTLEAICQTAFG 641
+L +RL++ ++ P D HD TTL IC +G
Sbjct: 126 ELTKRLRSHHSK-PMDPGHDFFLTTLNVICAIVYG 159
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,280,367
Number of Sequences: 59808
Number of extensions: 482577
Number of successful extensions: 1340
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -