Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0428
         (679 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CU21 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI0000D56A23 Cluster: PREDICTED: similar to transcript...    33   8.4  
UniRef50_Q8F5U1 Cluster: Transcriptional regulator, marR family;...    33   8.4  
UniRef50_A3W4D7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_Q5CU21 Cluster: Putative uncharacterized protein; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative
           uncharacterized protein - Cryptosporidium parvum Iowa II
          Length = 66

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +3

Query: 474 NDTPGLQVGFVTVLVAYLSDKSWVIVNNFTGDFVKTAM 587
           +DTPGL++G +TVLV  L+  S VIV +  G F +  M
Sbjct: 28  DDTPGLKLGPMTVLVMTLAYMSIVIVLHILGKFKEKIM 65


>UniRef50_UPI0000D56A23 Cluster: PREDICTED: similar to transcription
           factor cmyb; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to transcription factor cmyb - Tribolium
           castaneum
          Length = 677

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 673 SATPTGFLTVGRDARLSI*NEAGSIKYLNIAVFTK--SPVKLLTITQDLSLKYATRTVTN 500
           S T   F +    +  S+  +  S  YL++  +    SPVKL  +T D  LKY T +  N
Sbjct: 287 SHTVVSFSSSPPPSTTSVKADLPSYSYLDVNTYNNQTSPVKLTPMTDDFDLKYCTPSGIN 346

Query: 499 P 497
           P
Sbjct: 347 P 347


>UniRef50_Q8F5U1 Cluster: Transcriptional regulator, marR family;
           n=6; Bacteria|Rep: Transcriptional regulator, marR
           family - Leptospira interrogans
          Length = 106

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 453 EVSNEADNDTPGLQVGFVTVLVAYLSDKSWVIVNNFTGDFVKTAMFKYFMDPASFQILRR 632
           EV+    ++  G+ +G V   +  L DK W+   NF     K A + YF+ P+    +  
Sbjct: 18  EVNQREISEILGISLGKVNYCLKALMDKGWIKARNFKNSKHKLA-YAYFLTPSG---IEE 73

Query: 633 ASRPTVR 653
            +R TVR
Sbjct: 74  KARITVR 80


>UniRef50_A3W4D7 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius sp. 217|Rep: Putative uncharacterized
           protein - Roseovarius sp. 217
          Length = 926

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
 Frame = -1

Query: 559 KLLTITQDLSLKYATRTVTNPTCSPGVSLSA----SLETSI*H-RF*NNETV*QLNDVQI 395
           KL T+ +DL  + A    T+P+    V+ +A    +LET +   R  N +   QL   ++
Sbjct: 705 KLNTLHKDLQKRKAEAAKTDPSDQSAVTKAADDIAALETQLNSARAANEKLKSQLKSARV 764

Query: 394 D*EKNKKIDDAYF-VKGSVLSAS 329
           D ++ KK+DDA   +  SV+ AS
Sbjct: 765 DDQRQKKLDDANIALARSVMEAS 787


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,195,153
Number of Sequences: 1657284
Number of extensions: 11505482
Number of successful extensions: 24191
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24187
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)