Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0428
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80439-7|AAB37644.1|  344|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.      27   9.3  

>U80439-7|AAB37644.1|  344|Caenorhabditis elegans Hypothetical
           protein C01G8.6 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 125 CQSLQKTRTASLLKVGTRMRTPAKS 51
           C+SL  T+ + +LK G R R P+ S
Sbjct: 43  CESLDTTKESEMLKAGLRRRAPSIS 67


>AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical
           protein E03E2.1 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/81 (24%), Positives = 33/81 (40%)
 Frame = +3

Query: 426 SLF*NRCQMEVSNEADNDTPGLQVGFVTVLVAYLSDKSWVIVNNFTGDFVKTAMFKYFMD 605
           SLF N     ++ +A  +   LQ      +     +   +  N+F G F+K+A  + F+D
Sbjct: 174 SLFQNHTSYVLARKAFGNFAELQKSTAEKIAYIFPETKLIFKNSFVGHFLKSATQQKFLD 233

Query: 606 PASFQILRRASRPTVRKPVGV 668
                I    SR  V    G+
Sbjct: 234 YLLHLISNFQSRKNVDNNNGI 254


>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
           protein F22B5.7 protein.
          Length = 1415

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 201 LDSVKVTSNLYAVGTAPLAANVGKRSNSMKILVNSNAIEKVKKLALSTLP 350
           +D+V  T+NL AVG   LAA +GK + S+K   +        KL   T+P
Sbjct: 409 IDAVVATTNLEAVGEIVLAA-LGKPNPSIKTQTDLFLQRCFMKLNSQTMP 457


>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
          Length = 1415

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 201 LDSVKVTSNLYAVGTAPLAANVGKRSNSMKILVNSNAIEKVKKLALSTLP 350
           +D+V  T+NL AVG   LAA +GK + S+K   +        KL   T+P
Sbjct: 409 IDAVVATTNLEAVGEIVLAA-LGKPNPSIKTQTDLFLQRCFMKLNSQTMP 457


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,510,095
Number of Sequences: 27780
Number of extensions: 277567
Number of successful extensions: 595
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)