Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0427
         (819 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKS2 Cluster: Ferlin, putative; n=7; Plasmodium|Rep: ...    34   3.8  
UniRef50_Q5V4G5 Cluster: Long-chain fatty-acid-CoA ligase; n=1; ...    34   5.0  
UniRef50_Q4T3N3 Cluster: Chromosome undetermined SCAF9979, whole...    33   8.7  

>UniRef50_Q8IKS2 Cluster: Ferlin, putative; n=7; Plasmodium|Rep:
            Ferlin, putative - Plasmodium falciparum (isolate 3D7)
          Length = 1904

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -3

Query: 532  NTNRYSDYYRFSFQSDYPLFSVLEILHVNTLSNNFWDHYFTRAHKDT 392
            N N Y++YY    + +   F+   I H N LSNN +D Y +R  KDT
Sbjct: 1235 NYNNYNNYYD---KGNTLNFNNNNIHHFNKLSNNKFDSYLSRIQKDT 1278


>UniRef50_Q5V4G5 Cluster: Long-chain fatty-acid-CoA ligase; n=1;
           Haloarcula marismortui|Rep: Long-chain fatty-acid-CoA
           ligase - Haloarcula marismortui (Halobacterium
           marismortui)
          Length = 547

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 240 RYLNTSLMPCSNSGTSGSSCR*PAARTWWDTLDINLSK-IGIRACGHTSHAMSTD 79
           R+  T L     + + G  CR     TWWD   ++LS+  G+  CG  + AM  D
Sbjct: 290 RWAETDLSSLRFAKSGGGPCRKSVMETWWDR-GVDLSQGYGLTECGPNNFAMPED 343


>UniRef50_Q4T3N3 Cluster: Chromosome undetermined SCAF9979, whole
           genome shotgun sequence; n=2; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF9979,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 452

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = -2

Query: 104 TRRMPCPLTCPSSLPRVWRSVRRGMSPS 21
           TRRM C L CP+S    WRS+RR   PS
Sbjct: 39  TRRMSCCLPCPTS---AWRSLRRKKRPS 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,642,605
Number of Sequences: 1657284
Number of extensions: 13052249
Number of successful extensions: 30658
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30646
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)