Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0427
         (819 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   8.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 300 SVNRVGNDTTNSPGADVEWSRYLNTSLMPCSNSGTS 193
           SV  VG D  +SPGA    +    +   PCS + TS
Sbjct: 154 SVGLVGGDPASSPGAAAGRTGNSLSWNNPCSINSTS 189


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 288 VGNDTTNSPGADVEWSRYLNTSLMPCSNSGTS 193
           +  D TNS    V+     + S M CS++G S
Sbjct: 325 ITGDKTNSVFEHVKLGSLYHISFMACSSAGCS 356


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 423 ITTSQEHIKTLQLGGFDSWS 364
           I+   E+ K+L LGG   WS
Sbjct: 339 ISNKVEYAKSLNLGGVMIWS 358


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 98  DVCPHARMPILDKLISSVSHHV 163
           D   + ++P+L KLI S+  H+
Sbjct: 254 DAYGNVKIPVLCKLIQSIPTHL 275


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 408 EHIKTLQLGGFDSWSSYQ 355
           E    L+L GF+ W  YQ
Sbjct: 31  ERTPGLELEGFNFWGKYQ 48


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 408 EHIKTLQLGGFDSWSSYQ 355
           E    L+L GF+ W  YQ
Sbjct: 191 ERTPGLELEGFNFWGKYQ 208


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 408 EHIKTLQLGGFDSWSSYQ 355
           E    L+L GF+ W  YQ
Sbjct: 191 ERTPGLELEGFNFWGKYQ 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,418
Number of Sequences: 336
Number of extensions: 3453
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)