Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0426
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical pr... 122 2e-28
AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine... 122 2e-28
U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal catech... 98 6e-21
U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan hyd... 90 1e-18
U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan hyd... 90 1e-18
AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan hy... 90 1e-18
U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear fa... 31 1.3
U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear fa... 31 1.3
U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear fa... 31 1.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 28 8.9
>Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical
protein K08F8.4 protein.
Length = 457
Score = 122 bits (295), Expect = 2e-28
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = +2
Query: 2 GAGLLSSFGELQYCLSDKPELREFDPESTGGTKYPITEYQPVYFVANSFEDAQEKMIKFA 181
GAGLLSSFGELQY LSDKPE+ +FDP TKYPITEYQP YF+A SF A+ K+ +A
Sbjct: 344 GAGLLSSFGELQYALSDKPEVVDFDPAVCCVTKYPITEYQPKYFLAESFASAKNKLKSWA 403
Query: 182 QTIPRDFGVRYNPYTQSIDILDSARQIRVLMREVHQEMELLLNAMDKL 325
TI R F +RYN YTQ ++ILD ++ L R++ ++ L A+ K+
Sbjct: 404 ATINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEEALGKV 451
>AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine
hydroxylase protein.
Length = 457
Score = 122 bits (295), Expect = 2e-28
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = +2
Query: 2 GAGLLSSFGELQYCLSDKPELREFDPESTGGTKYPITEYQPVYFVANSFEDAQEKMIKFA 181
GAGLLSSFGELQY LSDKPE+ +FDP TKYPITEYQP YF+A SF A+ K+ +A
Sbjct: 344 GAGLLSSFGELQYALSDKPEVVDFDPAVCCVTKYPITEYQPKYFLAESFASAKNKLKSWA 403
Query: 182 QTIPRDFGVRYNPYTQSIDILDSARQIRVLMREVHQEMELLLNAMDKL 325
TI R F +RYN YTQ ++ILD ++ L R++ ++ L A+ K+
Sbjct: 404 ATINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEEALGKV 451
>U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform b protein.
Length = 454
Score = 98.3 bits (234), Expect = 6e-21
Identities = 43/108 (39%), Positives = 70/108 (64%)
Frame = +2
Query: 2 GAGLLSSFGELQYCLSDKPELREFDPESTGGTKYPITEYQPVYFVANSFEDAQEKMIKFA 181
GAGLLS++GEL + SD PE ++FDP T KY +YQP+YFVA+S DA K+ K+A
Sbjct: 341 GAGLLSAYGELMHACSDAPEHKDFDPAVTAVQKYEDDDYQPLYFVADSIHDALAKLRKYA 400
Query: 182 QTIPRDFGVRYNPYTQSIDILDSARQIRVLMREVHQEMELLLNAMDKL 325
++ R F V Y+P+T+SI+ ++S+ + + ++ + +A D++
Sbjct: 401 SSMDRPFSVVYDPFTKSIEAIESSADLEKAFSRLSNDLSAITHAADRM 448
>U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform b protein.
Length = 429
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/105 (39%), Positives = 65/105 (61%)
Frame = +2
Query: 2 GAGLLSSFGELQYCLSDKPELREFDPESTGGTKYPITEYQPVYFVANSFEDAQEKMIKFA 181
GAGLLSS GELQ+ + + FDP+ + IT +Q YF +FE+AQ+K+ F
Sbjct: 321 GAGLLSSAGELQHAVEGSATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQKLRMFT 380
Query: 182 QTIPRDFGVRYNPYTQSIDILDSARQIRVLMREVHQEMELLLNAM 316
+ R F VRYNPYT+S+++L+++R I + + + ++ LL A+
Sbjct: 381 NNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 425
>U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform a protein.
Length = 532
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/105 (39%), Positives = 65/105 (61%)
Frame = +2
Query: 2 GAGLLSSFGELQYCLSDKPELREFDPESTGGTKYPITEYQPVYFVANSFEDAQEKMIKFA 181
GAGLLSS GELQ+ + + FDP+ + IT +Q YF +FE+AQ+K+ F
Sbjct: 424 GAGLLSSAGELQHAVEGSATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQKLRMFT 483
Query: 182 QTIPRDFGVRYNPYTQSIDILDSARQIRVLMREVHQEMELLLNAM 316
+ R F VRYNPYT+S+++L+++R I + + + ++ LL A+
Sbjct: 484 NNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 528
>AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan
hydroxylase protein.
Length = 532
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/105 (39%), Positives = 65/105 (61%)
Frame = +2
Query: 2 GAGLLSSFGELQYCLSDKPELREFDPESTGGTKYPITEYQPVYFVANSFEDAQEKMIKFA 181
GAGLLSS GELQ+ + + FDP+ + IT +Q YF +FE+AQ+K+ F
Sbjct: 424 GAGLLSSAGELQHAVEGSATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQKLRMFT 483
Query: 182 QTIPRDFGVRYNPYTQSIDILDSARQIRVLMREVHQEMELLLNAM 316
+ R F VRYNPYT+S+++L+++R I + + + ++ LL A+
Sbjct: 484 NNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 528
>U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform b protein.
Length = 787
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 3 APVYCRPSASYSTVSQTNLS*ESLTPSLPGVPSIPS 110
AP C PS+S S++ N + S TP P P +P+
Sbjct: 741 APPACSPSSSNSSLGAANQAPVSNTPQDPNAPKLPT 776
>U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform a protein.
Length = 807
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 3 APVYCRPSASYSTVSQTNLS*ESLTPSLPGVPSIPS 110
AP C PS+S S++ N + S TP P P +P+
Sbjct: 761 APPACSPSSSNSSLGAANQAPVSNTPQDPNAPKLPT 796
>U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform c protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 3 APVYCRPSASYSTVSQTNLS*ESLTPSLPGVPSIPS 110
AP C PS+S S++ N + S TP P P +P+
Sbjct: 777 APPACSPSSSNSSLGAANQAPVSNTPQDPNAPKLPT 812
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 21 PSASYSTVSQTNLS*ESLTPSLPGVPSIPSQNTSPSISL 137
PSAS + +QT S E+ TP P S PS +PS S+
Sbjct: 662 PSASAAADAQTTTSSETSTPGEP-TSSTPSDTPAPSTSV 699
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +3
Query: 18 RPSASYSTVSQTNLS*ESLTPSLPGVPSIPSQNTSPSISLLTALKMPXXXXXXXXXXXHV 197
RP+ + +T + T S S P + + S T P S TA P
Sbjct: 405 RPNVTSTTTAPTTES--SAIPDVTSTTTTKSSTTPPVESTTTA---PVTKSSSTPPVKST 459
Query: 198 TLASVTIPTRRALTFWTPLARSGS*CGRCTKK 293
T+A VT+P+ T +T + S + C+K+
Sbjct: 460 TIAPVTMPSTTEKTTFTSTSSSTTSSPVCSKR 491
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 98 KYPITEYQPVYFVANSFEDAQEKMIKFAQTIPRDF 202
K P+T++ ++ F++AQE + K + + DF
Sbjct: 287 KDPVTDFLTCLYIKYDFDEAQEMLQKCEEVLSNDF 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,499,192
Number of Sequences: 27780
Number of extensions: 300968
Number of successful extensions: 716
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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