Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0424
         (769 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YBU3 Cluster: Putative uncharacterized protein; n=4; ...    38   0.36 
UniRef50_UPI00006CCA39 Cluster: hypothetical protein TTHERM_0028...    34   3.4  
UniRef50_Q54YK9 Cluster: SAP DNA-binding domain-containing prote...    33   5.9  

>UniRef50_Q4YBU3 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 1247

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = -1

Query: 631 KNNLFSLFYSRFLVSKKFLSLSCTYISTYIILKMFIIDM--IYVLVIPKLYM 482
           K+ LF   YS   +SKK  S S  + + Y +LK ++ID+  +  L+ PKL+M
Sbjct: 400 KDTLFDFEYSNTYLSKKITSTSVNFYAGY-VLKKYLIDICCVMTLLFPKLFM 450


>UniRef50_UPI00006CCA39 Cluster: hypothetical protein
           TTHERM_00283010; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00283010 - Tetrahymena
           thermophila SB210
          Length = 1019

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = -2

Query: 741 KTLIPSYFF---KLRIENSSYKSQNRFD--LK*NVYLKLNSIKIICSLFFIPDFLFLKS 580
           K LI S+FF    L +  S     NR    L+  +YL L SI I C  FF  DF+F+ S
Sbjct: 230 KILILSFFFAGASLGVMFSQVFISNRLGQALQIKIYLLLQSINIFCMCFFAIDFIFICS 288


>UniRef50_Q54YK9 Cluster: SAP DNA-binding domain-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: SAP DNA-binding
           domain-containing protein - Dictyostelium discoideum AX4
          Length = 953

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = -1

Query: 640 EFNKNNLFSLFYSRFLVSKKFLSLSCTYISTYIILKMFIIDMIYVL 503
           +F K+ L  + +S+FL+ K +  +   Y+ +Y+I  +  IDM+ +L
Sbjct: 552 QFTKDKLELIMHSKFLIEKPYKHMFEDYVGSYVISNVKSIDMLDLL 597


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,168,109
Number of Sequences: 1657284
Number of extensions: 9781469
Number of successful extensions: 22739
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22705
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)