Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0424
         (769 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14629| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)                   28   9.5  

>SB_14629| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 509 VYHIYYKHFQDNICRYV-STA*RKKLFRNKKSGIKKRE 619
           ++H+  KHF D I R V ST    +  R KK G++  E
Sbjct: 34  IFHLLEKHFTDAIIRLVGSTPVYAECVRKKKEGMEMME 71


>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
          Length = 998

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 581 VSFFKLYLHIYIYYLENVYNRYDIRARDTQIIY 483
           V  F +Y+HIY+Y   +  N   ++ +DTQ+ +
Sbjct: 798 VIIFAMYVHIYVYVKRSSRNA-GVKRKDTQLAF 829


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,718,299
Number of Sequences: 59808
Number of extensions: 281313
Number of successful extensions: 551
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)