Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0423
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69662-2|CAA93498.1|  440|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical pr...    29   4.9  

>Z69662-2|CAA93498.1|  440|Caenorhabditis elegans Hypothetical
           protein F56D5.2 protein.
          Length = 440

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -3

Query: 616 NMFMGFIYICHCVTQNLVPYFFTYNQETKNSVR-PDMKVVIQNRLKHTY*EVKDYLTMAN 440
           N F   IYI  C  + L+  FF    + +  +R  ++KV+IQ +L   Y   KD L  ++
Sbjct: 271 NYFRTLIYIIACSFEGLLETFFVSIHQDRCDIRQKEIKVIIQ-KLPPQYLFAKDTLEFSH 329

Query: 439 CISNL 425
              NL
Sbjct: 330 RTENL 334


>Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical
           protein F21D9.1 protein.
          Length = 367

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 161 FKVDNYFELTLLNQIESFTKIKKCW 87
           +K+D + E  L+N +  +   KKCW
Sbjct: 128 YKIDKFGERKLVNSVYKYRNAKKCW 152


>Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical
           protein C33D9.6 protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 544 NQETKNSVRPDMKVVIQNRLKHTY*EVKDYLTMANCISNLFVTIQES 404
           N E KN +R   K + +  +K    E+KDY  +   IS    T +E+
Sbjct: 307 NSEIKNLIREQSKEIHEKNVKIAKFEIKDYANIFRQISKNIFTNKEA 353


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,328,470
Number of Sequences: 27780
Number of extensions: 289045
Number of successful extensions: 504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)