Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0422
         (447 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   1.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   2.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.0  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   2.7  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   2.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.1  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 377 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 264
           KII ++  + +HN N Y ++Y   +  +     N NNN
Sbjct: 313 KIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNN 350


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 377 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 264
           KII ++  + +HN N Y ++Y   +  + C K   N N
Sbjct: 80  KIISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 377 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 264
           KII ++  + +HN N Y ++Y   +  + C K   N N
Sbjct: 80  KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 377 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 264
           KII ++  + +HN N Y ++Y   +  + C K   N N
Sbjct: 80  KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 377 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 264
           KII ++  + +HN N Y ++Y   +  + C K   N N
Sbjct: 80  KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 377 KIILNIQVQRLHNINIYSFSY 315
           KII ++  + +HN N Y ++Y
Sbjct: 80  KIISSLSNKTIHNNNNYKYNY 100


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 377 KIILNIQVQRLHNINIYSFSY 315
           KII ++  + +HN N Y ++Y
Sbjct: 80  KIISSLSNKTIHNNNNYKYNY 100


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
          phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 55 LYCFFYSLTRGDIT 14
          LY  FY L RG++T
Sbjct: 29 LYYDFYPLERGELT 42


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
          precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 55 LYCFFYSLTRGDIT 14
          LY  FY L RG++T
Sbjct: 44 LYYDFYPLERGELT 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,830
Number of Sequences: 438
Number of extensions: 2208
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)