Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0419
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 452 e-127
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 452 e-127
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 451 e-127
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 451 e-127
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 451 e-127
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 442 e-124
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 434 e-122
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 194 7e-50
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 192 2e-49
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 190 8e-49
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 190 8e-49
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 190 8e-49
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 190 1e-48
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 190 1e-48
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 190 1e-48
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 187 6e-48
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 127 9e-30
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 125 4e-29
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.038
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.27
At2g40070.1 68415.m04923 expressed protein 33 0.27
At3g08670.1 68416.m01007 expressed protein 31 0.61
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.81
At4g10120.1 68417.m01655 sucrose-phosphate synthase, putative si... 31 1.1
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.4
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.9
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 29 2.5
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 29 3.3
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 5.7
At2g15020.1 68415.m01710 expressed protein and genefinder 28 5.7
At1g68080.1 68414.m07777 expressed protein 28 5.7
At1g62870.1 68414.m07099 expressed protein 28 5.7
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 5.7
At4g30150.1 68417.m04287 expressed protein 27 10.0
At3g11690.1 68416.m01433 expressed protein 27 10.0
At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family... 27 10.0
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 452 bits (1113), Expect = e-127
Identities = 203/248 (81%), Positives = 227/248 (91%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLD 205
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRI 265
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 266 HFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
KDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN T +A
Sbjct: 326 KDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVA 385
Query: 723 EAWARLDH 746
E ++R+DH
Sbjct: 386 EVFSRIDH 393
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 452 bits (1113), Expect = e-127
Identities = 203/248 (81%), Positives = 227/248 (91%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLD 205
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRI 265
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 266 HFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
KDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN T +A
Sbjct: 326 KDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVA 385
Query: 723 EAWARLDH 746
E ++R+DH
Sbjct: 386 EVFSRIDH 393
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 451 bits (1112), Expect = e-127
Identities = 200/248 (80%), Positives = 231/248 (93%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
KDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T +A
Sbjct: 326 KDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA 385
Query: 723 EAWARLDH 746
E ++R+DH
Sbjct: 386 EVFSRIDH 393
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 451 bits (1111), Expect = e-127
Identities = 200/248 (80%), Positives = 230/248 (92%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
KDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T +A
Sbjct: 326 KDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA 385
Query: 723 EAWARLDH 746
E ++R+DH
Sbjct: 386 EVFSRIDH 393
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 451 bits (1111), Expect = e-127
Identities = 200/248 (80%), Positives = 230/248 (92%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
KDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T +A
Sbjct: 326 KDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA 385
Query: 723 EAWARLDH 746
E ++R+DH
Sbjct: 386 EVFSRIDH 393
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 442 bits (1089), Expect = e-124
Identities = 197/241 (81%), Positives = 225/241 (93%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 146 GSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
KDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T +A
Sbjct: 326 KDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA 385
Query: 723 E 725
E
Sbjct: 386 E 386
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 434 bits (1069), Expect = e-122
Identities = 193/248 (77%), Positives = 221/248 (89%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++D
Sbjct: 146 GSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLD 205
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRI 265
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVP
Sbjct: 266 HFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVP 325
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
KDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN T +A
Sbjct: 326 KDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVA 385
Query: 723 EAWARLDH 746
E ++R+DH
Sbjct: 386 EVFSRIDH 393
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 194 bits (472), Expect = 7e-50
Identities = 91/246 (36%), Positives = 146/246 (59%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 145 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 204
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+
Sbjct: 205 NEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRL 264
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 265 HFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMST 324
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ I ++ K + FV+W P K + PPT ++ A + N+T I
Sbjct: 325 KEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFVGNSTSIQ 376
Query: 723 EAWARL 740
E + R+
Sbjct: 377 EMFRRV 382
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 192 bits (468), Expect = 2e-49
Identities = 91/246 (36%), Positives = 145/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 145 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 204
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+
Sbjct: 205 NEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRL 264
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 265 HFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMST 324
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ I I+ K + FV+W P K + PP ++ A + N+T I
Sbjct: 325 KEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFVGNSTSIQ 376
Query: 723 EAWARL 740
E + R+
Sbjct: 377 EMFRRV 382
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 190 bits (463), Expect = 8e-49
Identities = 89/246 (36%), Positives = 145/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 264 HFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMST 323
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ + ++ K + FV+W P K + PPT ++ A + N+T I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQ 375
Query: 723 EAWARL 740
E + R+
Sbjct: 376 EMFRRV 381
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 190 bits (463), Expect = 8e-49
Identities = 89/246 (36%), Positives = 145/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 264 HFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMST 323
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ + ++ K + FV+W P K + PPT ++ A + N+T I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQ 375
Query: 723 EAWARL 740
E + R+
Sbjct: 376 EMFRRV 381
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 190 bits (463), Expect = 8e-49
Identities = 90/246 (36%), Positives = 145/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 264 HFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLST 323
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ + I+ K + FV+W P K + + P G ++ A + N+T I
Sbjct: 324 KEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTFIGNSTSIQ 375
Query: 723 EAWARL 740
E + R+
Sbjct: 376 EMFRRV 381
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 190 bits (462), Expect = 1e-48
Identities = 89/246 (36%), Positives = 145/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 264 HFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMST 323
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ + ++ K + FV+W P K + PPT ++ A + N+T I
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQ 375
Query: 723 EAWARL 740
E + R+
Sbjct: 376 EMFRRV 381
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 190 bits (462), Expect = 1e-48
Identities = 89/246 (36%), Positives = 145/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 264 HFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMST 323
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ + ++ K + FV+W P K + + P G ++ A + N+T I
Sbjct: 324 KEVDEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG----LKMASTFIGNSTSIQ 375
Query: 723 EAWARL 740
E + R+
Sbjct: 376 EMFRRV 381
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 190 bits (462), Expect = 1e-48
Identities = 88/246 (35%), Positives = 145/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 264 HFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMST 323
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ + ++ K + FV+W P K + PPT ++ A + N+T I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQ 375
Query: 723 EAWARL 740
E + R+
Sbjct: 376 EMFRRV 381
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 187 bits (456), Expect = 6e-48
Identities = 88/246 (35%), Positives = 144/246 (58%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 182
GSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++D
Sbjct: 144 GSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Query: 183 NEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 362
NEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 363 HFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 542
HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 264 HFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMST 323
Query: 543 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTGIA 722
K+V+ + ++ K + FV+W P K + + P G + A + N+T I
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG----LSMASTFIGNSTSIQ 375
Query: 723 EAWARL 740
E + R+
Sbjct: 376 EMFRRV 381
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 127 bits (306), Expect = 9e-30
Identities = 66/224 (29%), Positives = 118/224 (52%), Gaps = 7/224 (3%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMV 179
GSG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++
Sbjct: 146 GSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVL 205
Query: 180 DNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPR 359
DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR
Sbjct: 206 DNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPR 265
Query: 360 IHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCML 521
HF + Y P+ + + + +V ++ + N MV R+ KY++ +
Sbjct: 266 CHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNI 325
Query: 522 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 653
+G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 326 IQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 125 bits (301), Expect = 4e-29
Identities = 65/224 (29%), Positives = 118/224 (52%), Gaps = 7/224 (3%)
Frame = +3
Query: 3 GSGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMV 179
GSG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++
Sbjct: 146 GSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVL 205
Query: 180 DNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPR 359
DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR
Sbjct: 206 DNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPR 265
Query: 360 IHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCML 521
HF + Y P+ + + + +V ++ + N MV R+ KY++ +
Sbjct: 266 CHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNI 325
Query: 522 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 653
+G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 326 IQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYV 369
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 275 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 409
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 560 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 453
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +1
Query: 352 TPVSTS-HWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 528
TP+S S S +R + +PT ++ S S T S+P T +A P ++T L+ T
Sbjct: 236 TPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TA 293
Query: 529 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 651
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 294 RSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 31.5 bits (68), Expect = 0.61
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +1
Query: 319 TSPSSRLTWCLTPVSTSHWSRTRQSSLPR--RPTMNSFPSPRSQTHASSPPTRW*NATPV 492
+SPSSR + P + + S +SS P RP +S +++ SS P +TP
Sbjct: 194 SSPSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSSSMDKARPSLSSRP-----STPT 248
Query: 493 MASTWLAVCCTVVTSYPRM*TRPSLPSK--PSVLSNSSTGVQPVS 621
A ++ S P +RPS P++ PS S S+T +S
Sbjct: 249 SRPQLSASSPNIIASRPN--SRPSTPTRRSPSSTSLSATSGPTIS 291
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 309 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 449
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At4g10120.1 68417.m01655 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase, Zea mays,
PIR2:JQ1329; contains non-consensus (GC) donor splice
site at intron 4
Length = 1050
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 725 FGDAGGVGQHADGTLNLGQVASGHHGGWLVVDTDLETGWTPVDELDST 582
+ DAG V H G LN+ V +GH G + L+ G +++D T
Sbjct: 337 YADAGEVAAHLAGALNVPMVLTGHSLGRNKFEQLLQQGRITREDIDRT 384
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 641 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 537
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 224 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 90
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 29.5 bits (63), Expect = 2.5
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Frame = +1
Query: 319 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMN------SFPSPRSQTHASSPP----T 468
+ PSSR T + + S+ R SS+P++ T S SP+ S P T
Sbjct: 107 SDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSPKRTVSRSLTPSSRKT 166
Query: 469 RW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLP-SKPSVLSNSSTGVQPVSRSVSTTSH 645
+TP ST + + T+ +R P +KP + +N+S+ RS S TS
Sbjct: 167 PSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTN--VRSSSVTSR 224
Query: 646 P 648
P
Sbjct: 225 P 225
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Frame = -1
Query: 377 DQWEVDTG-VRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQ-VGVGWALNVEITAA 204
D+ E+D + H +L ++ + E+Q+ G+ E + G G +L +
Sbjct: 319 DEIEIDINDLSHDALFQLRDLFDEFLRENQKKDSNGEPCVLELLHGSGPGNSLTQHCDGS 378
Query: 203 DVIDGFI--------VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 75
++ D + + H STVR K VGG +++ G +L G DG
Sbjct: 379 ELEDEDVDIGNYEHPISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 525 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 668
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At2g15020.1 68415.m01710 expressed protein and genefinder
Length = 526
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 303 GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 479
G N+ L +F ++L+P + F T A + K Y LS+ N+ E N++VK
Sbjct: 212 GLGNLGLKQFSSSLMPRHSLGFSYATEAHGLWILKGYFPILSMNVTNNSSNEVHNKIVK 270
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 599 DELDSTLGFDGSDGRVHILGYDVTTVQ 519
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 334 RLTWCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 465
R + C S S+ SRT L R P NS P P S S PP
Sbjct: 80 RCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 42 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 203
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 204 CRRNLDIERPTYTNL 248
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
>At4g30150.1 68417.m04287 expressed protein
Length = 2009
Score = 27.5 bits (58), Expect = 10.0
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 99 STAVVEPYNSILTTHTTLEHSDCAFMVD-NEAIYDIC-RRNL--DIERPTYTNLNRLIGQ 266
S V+EP++ L TH T ++ C F+ E D+ NL D + +L RLI
Sbjct: 295 SCLVLEPFSRFLMTHPTTKNGFCDFLDKLFEPFMDVLGLLNLIEDKNKDLEISLLRLIED 354
Query: 267 IVS-SITASLRFDGALNV 317
I+S ++ S DG L +
Sbjct: 355 ILSLALFHSAHIDGFLGL 372
>At3g11690.1 68416.m01433 expressed protein
Length = 252
Score = 27.5 bits (58), Expect = 10.0
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 352 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 531
TP S+ S RQ L R +++S PSPR+ S+P T A+ W C +V
Sbjct: 21 TPSSSPSRSNRRQPLLQR--SLSS-PSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLV 77
>At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family
protein
Length = 242
Score = 27.5 bits (58), Expect = 10.0
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 319 TSPSSR-LTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 495
T P+S TW + + ++S T +SLP+ +N + + A+SPP++ PV
Sbjct: 82 TKPNSTSFTWYPSRTGSYYFSFTNNTSLPKTCQLNQKLTVQVILAAASPPSQPPATAPVP 141
Query: 496 AS 501
S
Sbjct: 142 VS 143
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,544,155
Number of Sequences: 28952
Number of extensions: 405329
Number of successful extensions: 1429
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -