Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0418
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   2.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.5  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -1

Query: 702 WLPERNFLNTHEACGEY*AVGSGSALPLALLKSMGDGNHSPLGGG 568
           W P R + +  +A     A   G       L S GD +++ +G G
Sbjct: 119 WCPRREWSSPPDARAASDAARRGVLYSSVFLGSPGDASNASIGSG 163


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -1

Query: 702 WLPERNFLNTHEACGEY*AVGSGSALPLALLKSMGDGNHSPLGGG 568
           W P R + +  +A     A   G       L S GD +++ +G G
Sbjct: 275 WCPRREWSSPPDARAASDAARRGVLYSSVFLGSPGDASNASIGSG 319


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 24  NQGSYFMFIYFFKLNYTL**NLLGVNLKITVVFV 125
           +Q   F  + FF ++YTL  +++G      V+F+
Sbjct: 349 HQKVQFSVLGFFVVDYTLLYSIVGAVTTYLVIFI 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,211
Number of Sequences: 336
Number of extensions: 4461
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)