Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0418
         (789 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0844 - 6586345-6586854                                           30   1.8  
02_02_0423 - 10064902-10064918,10064919-10064991,10066187-10066546     28   9.7  

>01_01_0844 - 6586345-6586854
          Length = 169

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 545 PFRQTKHMPPPNGEWLPSPMDFSNARGRAEPL 640
           P R+   +PP     LP P+D+  A   AEPL
Sbjct: 26  PARRPADLPPQAAVLLPEPVDYREAAADAEPL 57


>02_02_0423 - 10064902-10064918,10064919-10064991,10066187-10066546
          Length = 149

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +2

Query: 107 NHRGICIYNQFACLLTTGND 166
           N+R +C++ + AC+ + GND
Sbjct: 29  NYRVLCMFGELACVFSPGND 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,039,765
Number of Sequences: 37544
Number of extensions: 421650
Number of successful extensions: 880
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)