Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0418
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069780-1|AAL39925.1|  741|Drosophila melanogaster SD02338p pro...    29   5.5  
AY069301-1|AAL39446.1|  518|Drosophila melanogaster HL03404p pro...    29   5.5  
AE014297-3695|AAF56384.1|  208|Drosophila melanogaster CG11786-P...    29   5.5  
AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA ...    29   5.5  

>AY069780-1|AAL39925.1|  741|Drosophila melanogaster SD02338p
           protein.
          Length = 741

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 542 CPFRQTKHMPPPNGEWLPSPMDFSNARGRAEPLP 643
           CP +Q +H+PPP G  L  P       G A P P
Sbjct: 695 CPAQQQQHLPPPPGSGLIHPPP-GTPTGTAAPPP 727


>AY069301-1|AAL39446.1|  518|Drosophila melanogaster HL03404p
           protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 542 CPFRQTKHMPPPNGEWLPSPMDFSNARGRAEPLP 643
           CP +Q +H+PPP G  L  P       G A P P
Sbjct: 472 CPAQQQQHLPPPPGSGLIHPPP-GTPTGTAAPPP 504


>AE014297-3695|AAF56384.1|  208|Drosophila melanogaster CG11786-PA
           protein.
          Length = 208

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = +2

Query: 539 YCPFRQTKHMPPPNGEWLPSPMDFSNARGRAE--PLPTA*YSP 661
           Y P     ++PPPN  +LP P ++    G     P P   Y P
Sbjct: 73  YNPPPNNNYLPPPNNNYLPPPPEYGPPAGYPSYGPPPPPFYKP 115


>AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA
            protein.
          Length = 2252

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 542  CPFRQTKHMPPPNGEWLPSPMDFSNARGRAEPLP 643
            CP +Q +H+PPP G  L  P       G A P P
Sbjct: 2206 CPAQQQQHLPPPPGSGLIHPPP-GTPTGTAAPPP 2238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,876,008
Number of Sequences: 53049
Number of extensions: 762312
Number of successful extensions: 1487
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)