Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0417
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   3.3  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   3.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.8  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 456 QKYDCVITVDNPINNKW 406
           ++YD VIT D P+   W
Sbjct: 433 ERYDFVITADQPVGAYW 449


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 456 QKYDCVITVDNPINNKW 406
           ++YD VIT D P+   W
Sbjct: 433 ERYDFVITADQPVGAYW 449


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 645  LFYRDHLFIVCWFIYCDYTYILFSFKCFL*PYWIY 749
            L+Y D +F V +F+     ++   FK +    W +
Sbjct: 1339 LYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCW 1373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,428
Number of Sequences: 2352
Number of extensions: 13493
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)