Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0416
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    26   0.33 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.58 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.58 

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -2

Query: 462 YWYIYEHEFYHGTSAAETSRMYGTGVQKKARYVFGFNVFVLEISTFR 322
           Y+ IYE  +Y  +   +       G  +K    +  N+F L++ TF+
Sbjct: 278 YFAIYEMHWYDASKQIQNEVFIFMGQLEKPIVFYVANIFSLDLDTFK 324


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 310 GRPETKVENEELQAIVEADPSQS 242
           G+P+ K E++E    VE DP+++
Sbjct: 130 GKPDCKDESDENSCTVETDPNRA 152


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 310 GRPETKVENEELQAIVEADPSQS 242
           G+P+ K E++E    VE DP+++
Sbjct: 137 GKPDCKDESDENSCTVETDPNRA 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,226
Number of Sequences: 336
Number of extensions: 4065
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)