Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0416
         (685 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12515| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_8486| Best HMM Match : Granulin (HMM E-Value=0)                     28   8.1  

>SB_12515| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 769

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -1

Query: 385 PKESTVCFWFQRFRS*NFDLQNQPRGRPETKVENEELQAIVE 260
           P+   V FW Q+    NF+  N PRGR     E EELQA+++
Sbjct: 721 PETFRVAFWLQQ----NFE--NSPRGRSHLAYETEELQAVLK 756


>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
          Length = 878

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 433 PWHQCCRNISNVRHWCPKESTVC 365
           P+H CC + S  +H CP  +  C
Sbjct: 832 PYHTCCGSSSAQQHCCPLPNASC 854


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,890,116
Number of Sequences: 59808
Number of extensions: 479507
Number of successful extensions: 1187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)