Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0416
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    47   2e-07
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   6.3  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -1

Query: 382 KESTVCFWFQRFRS*NFDLQNQPR-GRPETKVENEELQAIVEADPSQSTSEIDAGFGVSD 206
           KE     WF +FRS +F L+++ R GRP  +V+++ ++AI+++D   +T EI     VS 
Sbjct: 39  KERQCQNWFDKFRSGDFSLKDEKRSGRP-VEVDDDLIKAIIDSDRHSTTREIAEKLHVSH 97

Query: 205 KTVLIHLKQI 176
             +  HLKQ+
Sbjct: 98  TCIENHLKQL 107



 Score = 31.5 bits (68), Expect = 0.008
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 119 FSKGINELPMRWQKCIDNNGAY 54
           + +GI  LP RWQK ID NG +
Sbjct: 318 YERGIMMLPERWQKVIDQNGQH 339


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 82  CHLIGSSLIPLLKTPINSLKAVWIAFWIFLSRFA 183
           CH +    I  LK PI  + A W+   I    FA
Sbjct: 144 CHPLRVYTISGLKRPIRFILAAWLIALISAIPFA 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,465
Number of Sequences: 438
Number of extensions: 4529
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)