Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0415
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical
           protein K08G2.7 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +2

Query: 572 HINFKVIMLSYIIQIKYSILMIIKLFLNRLPSCTTYYNQSCGVFE 706
           +++  VI LSYI+  K ++   +KLF + + +C  +Y   C +F+
Sbjct: 267 YVSIFVIQLSYILCNKRNMSSFLKLFKSDV-TCLKFYCPCCRIFK 310


>Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical
           protein F38B7.7 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
 Frame = +2

Query: 482 ICLFK-MYNVFMNLVLKCNVTGRCTPKSLCDHINFKVIMLSYIIQIKYSILM-----IIK 643
           IC+++ + N++   +L     G   PK++     +   + S +IQ+  S+ +     II 
Sbjct: 55  ICVYRSLSNIY---ILATTFIGLFLPKTIIGCSPYHPFIESTLIQVSNSLYLGNEYQIIL 111

Query: 644 LFLNRLPSC--TTYYNQSCGV 700
           + +NR  +    TYYN+ CG+
Sbjct: 112 VAINRFVAMFLPTYYNKICGI 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,495,596
Number of Sequences: 27780
Number of extensions: 305240
Number of successful extensions: 582
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)