Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0413
(772 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.4
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 2.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.4
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 3.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 4.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.5
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 26 FEYSYYLFNQFFFINY 73
F +Y++F FFFI+Y
Sbjct: 470 FPVAYFMFLTFFFIHY 485
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 26 FEYSYYLFNQFFFINY 73
F +Y++F FFFI+Y
Sbjct: 456 FPVAYFMFLTFFFIHY 471
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 26 FEYSYYLFNQFFFINY 73
F +Y++F FFFI+Y
Sbjct: 490 FPVAYFMFLTFFFIHY 505
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 26 FEYSYYLFNQFFFINY 73
F +Y++F FFFI+Y
Sbjct: 439 FPVAYFMFLTFFFIHY 454
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 241 FGSIFSSKLMYKIASHWLGRYFFYVLSLQLGPNNT 137
F IF+ M + HW G F V LQ P+N+
Sbjct: 276 FMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNS 310
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 23 PFEYSYYLFNQFFFINYHKSILNNFSLMHVLR 118
P +Y + +FNQF + IL+ + +LR
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILR 209
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 256 CILVTCTCHRRNSNKYLKNLFEILH 330
C VT H+R S+K L++ ++H
Sbjct: 15 CQDVTSAIHQRKSSKNLEHSMNVIH 39
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 241 FGSIFSSKLMYKIASHWLGRYFFYVLSLQLGPNNT 137
F IF+ M + HW G F V LQ P+N+
Sbjct: 244 FMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNS 278
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 23 PFEYSYYLFNQFFFINYHKSILNNFSLMHVLR 118
P +Y + +FNQF + IL+ + +LR
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILR 209
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 213 INFEEKIDPK*VPFMHF 263
I F +K+ P +PF HF
Sbjct: 267 IKFGDKVGPACLPFQHF 283
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 23 PFEYSYYLFNQFFFINYHKSILNNFSLMHVLR 118
P +Y + +FNQF + IL+ + +LR
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILR 209
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 640 NNHQYGVFNLNYIAKHNNL 584
NN+ Y +N NY H N+
Sbjct: 320 NNYNYNNYNNNYKPLHYNI 338
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,491
Number of Sequences: 438
Number of extensions: 3875
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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