Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0412
         (747 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    42   0.021
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   0.80 
UniRef50_Q26HS3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q4S1P2 Cluster: Chromosome 6 SCAF14768, whole genome sh...    33   9.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 41.5 bits (93), Expect = 0.021
 Identities = 21/32 (65%), Positives = 22/32 (68%)
 Frame = +1

Query: 55  PLTFLPDLLSGSRFRSSVRFCEALLLLGPVLA 150
           P+ FL      SRFRS  RFCEALLLLG VLA
Sbjct: 74  PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLA 105


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.3 bits (80), Expect = 0.80
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +1

Query: 43  HRHSPLTFLPDLLSGSRFRSSVRF 114
           HR  PL+F PDLLSGSRFR+   +
Sbjct: 392 HRCCPLSFSPDLLSGSRFRTGAEY 415


>UniRef50_Q26HS3 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BBFL7
          Length = 394

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 679 EESRGNSELALFQIYLNTNLKEIPNRHL 596
           EE +GN+E  +F  YL+ +LKEIP R L
Sbjct: 97  EELKGNAEGYVFSAYLDYHLKEIPERSL 124


>UniRef50_Q4S1P2 Cluster: Chromosome 6 SCAF14768, whole genome
           shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
           Chromosome 6 SCAF14768, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 1286

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 12/51 (23%), Positives = 28/51 (54%)
 Frame = -2

Query: 164 KPDEVANTGPSKSSASQNLTLDRKREPLRRSGKKVSGLCLWVNNSLVKPFI 12
           +P+EV   G +       + L R++ P R + +++ G C++ +  L +P++
Sbjct: 797 RPEEVGRVGGAGPEGCAQVRLARRKGPARPASRRLKGTCVFCSFLLKEPYV 847


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,874,123
Number of Sequences: 1657284
Number of extensions: 10451736
Number of successful extensions: 22442
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22441
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)