Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0412
         (747 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0702 - 19587943-19588168,19588423-19588525,19588809-195889...    29   3.0  
01_06_1111 - 34599014-34599215,34599378-34599497,34599654-345997...    28   9.1  

>09_04_0702 -
           19587943-19588168,19588423-19588525,19588809-19588923,
           19589061-19589086,19589178-19589398,19589493-19589608,
           19589695-19589953,19590052-19590139,19590236-19590307,
           19590401-19590476,19590746-19590809,19591139-19591259,
           19592391-19592451,19592682-19592828
          Length = 564

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 312 LKKYFEATLSRMNSSHS*SGYFVIFFLPMLIALRGY 205
           L+ Y EATL  + +  +  GYFV  FL +   L GY
Sbjct: 478 LQDYIEATLQSIRNGSNVQGYFVWSFLDVFEYLFGY 513


>01_06_1111 -
           34599014-34599215,34599378-34599497,34599654-34599760,
           34600452-34600480,34600768-34600982,34601215-34601330,
           34601960-34602218,34602342-34602429,34602932-34603003,
           34603080-34603155,34603579-34603637,34603937-34604000,
           34604104-34604232
          Length = 511

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 312 LKKYFEATLSRMNSSHS*SGYFVIFFLPMLIALRGY 205
           +K Y E  L+   +  +  GYF  FF+ M   L GY
Sbjct: 433 IKGYIEGVLNATRNGVNARGYFAWFFVDMFELLSGY 468


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,908,724
Number of Sequences: 37544
Number of extensions: 269131
Number of successful extensions: 566
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)