Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0412
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   7.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   7.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   7.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   7.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   7.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   7.0  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 540 NCIPNLCTYVMINKQTLSL 484
           NC PN CT+   N  T  L
Sbjct: 429 NCGPNPCTHTTTNGCTAEL 447


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 540 NCIPNLCTYVMINKQTLSL 484
           NC PN CT+   N  T  L
Sbjct: 415 NCGPNPCTHTTTNGCTAEL 433


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 540 NCIPNLCTYVMINKQTLSL 484
           NC PN CT+   N  T  L
Sbjct: 449 NCGPNPCTHTTTNGCTAEL 467


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 540 NCIPNLCTYVMINKQTLSL 484
           NC PN CT+   N  T  L
Sbjct: 398 NCGPNPCTHTTTNGCTAEL 416


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 433 KCQDTGTYLIDLNG 392
           KC+DT  Y+ D+ G
Sbjct: 192 KCKDTFAYIADVTG 205


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -2

Query: 473 TTVKLTIDRIELHKMPRYRYLPNRS*W 393
           + V   +DR+     P  RY P R  W
Sbjct: 704 SVVSGALDRLHYETDPCVRYYPRRKEW 730


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,595
Number of Sequences: 438
Number of extensions: 3609
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)