SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0410
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817...    34   0.12 
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700...    34   0.16 
07_03_0798 - 21581718-21581724,21582642-21582934                       33   0.37 
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508...    32   0.49 
02_01_0483 - 3467813-3467873,3468072-3468154,3468505-3468579,346...    31   0.85 
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315...    31   1.1  
11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617     30   2.0  
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269...    29   3.4  
11_06_0724 - 26696401-26696703,26696875-26697025,26697115-266971...    29   3.4  
11_04_0451 - 17863381-17864808                                         29   3.4  
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357...    29   3.4  
09_03_0067 - 12035991-12036389,12036928-12037071,12037917-120379...    29   4.5  
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903...    29   4.5  
06_01_0226 - 1730931-1731527,1732290-1732469                           29   4.5  
04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095     29   4.5  
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216...    29   4.5  
10_02_0071 + 4928899-4929465                                           29   6.0  
05_06_0066 + 25307863-25307871,25308431-25308570,25308712-253087...    29   6.0  
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430...    29   6.0  
12_01_0552 + 4469009-4469080,4470052-4470117,4470808-4470941,447...    28   7.9  
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538...    28   7.9  
06_03_0234 + 18555036-18555264,18559110-18559234,18559506-18559925     28   7.9  
03_06_0316 + 33091194-33091370,33091451-33092155                       28   7.9  
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911...    28   7.9  
01_01_0051 + 389051-389623                                             28   7.9  

>01_03_0255 -
           14281004-14281066,14281114-14281203,14281672-14281737,
           14281837-14281907,14282021-14282153,14282245-14283898,
           14285346-14285935
          Length = 888

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
 Frame = +2

Query: 311 DEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRL 490
           +EQ  L      ++ +E + +   E + R+RR+    ++    E+A R A+  A A  R+
Sbjct: 531 EEQRKLERDREEELEREREMMRRREHEERKRREKER-EARHIVEKAMREARERAAAEARM 589

Query: 491 -ANESPEQRATR--LKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANE 637
            A     QRA R  +++ +  A +R ++E RE    R A+ +A A  R+A E
Sbjct: 590 QAEREARQRAERAAVQKAAAEARERAAAEARE----RAAKAAAEAKERVAEE 637


>02_04_0513 -
           23569212-23569675,23569759-23569801,23569888-23570000,
           23570099-23570158,23570472-23570541,23570887-23570951,
           23571548-23571685,23571764-23573015
          Length = 734

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
 Frame = +2

Query: 314 EQETLNTVEPVDMIQEMDPLSLL----EPKARRRRKGSGPKSETSEERAARLAKM-SAYA 478
           EQE  + + PVD I+  D + L     E K     + S P  + S ++  R A + S YA
Sbjct: 495 EQEKSDVISPVDAIRPADDVELREQDNESKPAPEGENSKPDRQVSPDKLLRAALLRSRYA 554

Query: 479 -----AQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETP 643
                AQ + ++  +++   L+++ +    RL +E       R A   A A R+   E  
Sbjct: 555 DVIVKAQGILSQGGDKQ-EELEKLQKEEKARLLAEGNAAMEARRAEAEAEAKRKRDLERE 613

Query: 644 AQRQA 658
             RQA
Sbjct: 614 KARQA 618


>07_03_0798 - 21581718-21581724,21582642-21582934
          Length = 99

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 21/70 (30%), Positives = 35/70 (50%)
 Frame = +2

Query: 341 PVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRAT 520
           PVD   E +P ++  P  +RRR+ SGP  + +      +++ +A A+   A   P  R T
Sbjct: 17  PVDQAAEEEPAAVAPPAEKRRRRPSGPAWKPT---LGAISEDAAVASSAAAKAKPAAR-T 72

Query: 521 RLKRMSEYAA 550
           + K   + AA
Sbjct: 73  KAKAKGKAAA 82


>04_03_0496 + 16549333-16549465,16549620-16550020,16550412-16550880,
            16552038-16552076,16553151-16553272,16553531-16553677,
            16554097-16554186,16554274-16554398,16554567-16554772,
            16554951-16555075,16555528-16555722,16556295-16556337,
            16556762-16557267,16558198-16558570,16559772-16560062,
            16560132-16561101,16561196-16561892,16562378-16562658,
            16562731-16563400,16563860-16564034,16565103-16565659
          Length = 2204

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
 Frame = -2

Query: 690  SQHMPTSSNSLACL-CAGVSLASRRAAYADILANLIALCSL-VSDESLLAAYSDIRFSLV 517
            S  +PTS+    CL CA   L+S  +A A  +++ +A  SL ++D + LA        L+
Sbjct: 747  SHSLPTSAGGRVCLSCAAALLSSAASAPAHHVSHALAALSLALADPAFLAPLRAAHPRLL 806

Query: 516  ARCSGDSFASLCAAYADILASRAA-LSSDVS 427
            A    ++ A   +     LA++A+ L++D++
Sbjct: 807  AAPLAEALAGAASRRDAALAAQASDLAADLA 837


>02_01_0483 -
           3467813-3467873,3468072-3468154,3468505-3468579,
           3468728-3468782,3470595-3470950
          Length = 209

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
 Frame = +2

Query: 311 DEQETLNTVEPVDMIQEMDPLSLLEPKARR-------RRKGSGPKSETSEERAARLAKMS 469
           DEQ++    E  D  +   PLS +  + RR        R+G   KSET EE AAR     
Sbjct: 19  DEQQSKEEEEEADTKEGSCPLSRINGRRRRSANIRKGERRGGEWKSETYEEEAARGEGSG 78

Query: 470 AYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQR 583
             + Q       ++R  R +R +  + + +   +  Q+
Sbjct: 79  VLSGQTNEIVGEKKRRRRARRDTNESGEAIRDGSEGQK 116


>01_03_0232 +
           14030821-14030904,14031029-14031374,14031475-14031599,
           14031927-14032023,14032459-14032691,14032765-14032885,
           14033319-14033374,14033630-14033703,14034193-14034239,
           14034458-14034507,14034860-14034922,14035160-14035240,
           14035517-14035627,14035714-14035789,14036216-14036358,
           14036775-14036848,14037304-14037409,14037492-14037547,
           14038272-14038378,14041150-14041598
          Length = 832

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 383 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLA 493
           E K +R+R+G G   + SE  AA+L  MS    Q LA
Sbjct: 67  EDKRKRKRRGDGEDVDNSESDAAKLEGMSYRELQALA 103


>11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617
          Length = 772

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
 Frame = -2

Query: 687 QHMPTSSNSLACLCAGV--SLASRRAAYADILANLIALCS-LVSDESLLAAYSDIRF-SL 520
           QH   + +SL  +   V  S A +       L +L+  C+ LVS     AA   +     
Sbjct: 370 QHQMAADSSLHSMLGSVIQSEAEQEQDSGLQLVHLLLACADLVSKGDHPAALRHLHLLRR 429

Query: 519 VARCSGDSFASLCAAYADILASRAALSSDVSLFGPEP 409
           VA   GDS   + + +AD LA+R +L S  +   P P
Sbjct: 430 VASPLGDSMQRVASHFADALAARLSLLSSPTSASPSP 466


>12_02_0340 -
           17725866-17725884,17726046-17726326,17726842-17726928,
           17727018-17727113,17728484-17728585,17728720-17728762,
           17728834-17728952,17729348-17729444,17730153-17730214,
           17730370-17730432,17730847-17730949,17731402-17731497,
           17731594-17731742,17732356-17732529,17733078-17733156,
           17733807-17733913,17733994-17734062,17734879-17735043,
           17735206-17735703
          Length = 802

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
 Frame = +2

Query: 392 ARRRRKGSGPKSETSEERAARLA---KMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 562
           AR  R+G      T ++R+   A   K  +    R+  E P     +L    E     + 
Sbjct: 531 ARAGREGYAVTFVTDDDRSLLKAIAKKAGSQLKSRIVAEKPVAECAKLIEELEDQISTII 590

Query: 563 SETREQRAIRLARMSAYAARRL 628
            E RE+R +R A M A  A  +
Sbjct: 591 QEEREERILRKAEMEATKAENM 612


>11_06_0724 -
           26696401-26696703,26696875-26697025,26697115-26697184,
           26697526-26697736,26697928-26698085,26698684-26699500
          Length = 569

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 519 VARCSGDSFASLC-----AAYADILASRAALSSDVSLFGPEPFLR 400
           VA C GD+ AS C     AAYA   A    LS D ++F  E  LR
Sbjct: 80  VALCRGDANASACSGCVDAAYAAATARLCPLSKDAAVFYDECALR 124


>11_04_0451 - 17863381-17864808
          Length = 475

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -2

Query: 699 PAFSQHMPTSSNSLACLCAGVSLASRRAAYADILANLI-ALCSLVS 565
           PAF +H P+ S SLA L A +S  +   +   +LA L  AL +LVS
Sbjct: 37  PAFRRHWPSISASLAALSASLSHPAFPPSAPRLLAPLASALSALVS 82


>10_01_0326 +
           3574129-3574329,3575144-3575692,3575914-3576072,
           3576349-3577543,3577626-3577762,3578052-3578242,
           3578888-3579218
          Length = 920

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/72 (26%), Positives = 29/72 (40%)
 Frame = +2

Query: 368 PLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYA 547
           P+S      ++  KG GP S      +     MSA  +  LA    E+R   +  + EY 
Sbjct: 306 PISTTCYANKQNVKGKGPMSAVIRASSLTFPNMSAIISTHLAGLPEEKRICLMDALGEYD 365

Query: 548 AKRLSSETREQR 583
            +   S T  +R
Sbjct: 366 KQAKESATEIER 377


>09_03_0067 -
           12035991-12036389,12036928-12037071,12037917-12037946,
           12039881-12040159
          Length = 283

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 471 HMQHRGWQMSHRNSAPLD*SVCPNM 545
           H+QHR WQM H  +AP+    CP++
Sbjct: 247 HLQHR-WQMQHAQTAPMI-PTCPSI 269


>08_02_1147 -
           24688686-24689729,24689875-24690036,24690339-24690368,
           24690713-24690860,24691302-24691489
          Length = 523

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 24/60 (40%), Positives = 31/60 (51%)
 Frame = +2

Query: 401 RRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQ 580
           RR+G    SE  EER ARL +M A A         EQR +RLK+ ++  AK  +S    Q
Sbjct: 423 RRRGVQHMSE--EEREARLRQMQADAEVH-----EEQRWSRLKKAADDDAKEAASVNANQ 475


>06_01_0226 - 1730931-1731527,1732290-1732469
          Length = 258

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/82 (24%), Positives = 40/82 (48%)
 Frame = +2

Query: 314 EQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLA 493
           EQE    +   D+++ ++  +  +   RR+R G+ P +   +    R  +++A  A R  
Sbjct: 160 EQEPAGQLRGSDVLRALERAAAAKEAKRRKRAGARPAARRQDAGERRGGELAAAGAAR-P 218

Query: 494 NESPEQRATRLKRMSEYAAKRL 559
            E   + ATR++ + E   K+L
Sbjct: 219 IEIRREWATRIREL-ELRVKQL 239


>04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095
          Length = 597

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 22/107 (20%), Positives = 47/107 (43%)
 Frame = +2

Query: 374 SLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAK 553
           +LL+ +  +R++ S    E +      + +   +  Q +  +  +QRA   ++      +
Sbjct: 289 ALLQQRMLKRQQMSALSRERALAHKRFVLQQRQWRQQMVEQQQQQQRAPMQQQRMPVVQQ 348

Query: 554 RLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLEDVGICCEK 694
              +  R+QR   +    AYA +     TP +R+A + E V +  +K
Sbjct: 349 ---AAPRKQRVFTVTVSRAYALQHQRGSTPEERRASVRERVRLELQK 392


>02_05_0665 -
           30720842-30721003,30721290-30721448,30721555-30721687,
           30722042-30722227,30722377-30722906
          Length = 389

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 22/85 (25%), Positives = 34/85 (40%)
 Frame = +2

Query: 377 LLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKR 556
           LL P A R   GSG  S +    AAR ++++A   +      P         M     + 
Sbjct: 15  LLRPSAARAGSGSGNLSSSPPPPAARPSRLAALIGRAAGRRGPSMLVRETAAMQLERRRA 74

Query: 557 LSSETREQRAIRLARMSAYAARRLA 631
             + +R   A+ +A   A+AA   A
Sbjct: 75  DWAHSRPVVALDIAWNVAFAAAAAA 99


>10_02_0071 + 4928899-4929465
          Length = 188

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
 Frame = +2

Query: 347 DMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKM--SAYAAQRLANESPEQRAT 520
           D++  +  LS +  KA  +R G G  S +S  RAA    +  S      + NE+ E    
Sbjct: 36  DVVLRLIMLSAVS-KASVKRTGGGKASSSSSPRAAPPPPVMTSCRRDDSIRNEAVEDCIE 94

Query: 521 RLKRMS-EYAAKRLSSETREQRAIRLARMSAYAARR 625
            LKR S E  A +LSS T  +  + +AR  A A  +
Sbjct: 95  FLKRSSAEGDAAKLSSVTAAE-TVAVARDLAMATTK 129


>05_06_0066 +
           25307863-25307871,25308431-25308570,25308712-25308754,
           25308994-25310022
          Length = 406

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 26/129 (20%), Positives = 55/129 (42%)
 Frame = +2

Query: 311 DEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRL 490
           ++ +T+ T +P   + EM   +   P+A ++  G G       E  A+L K     A+  
Sbjct: 39  EDSDTV-TAKPARAVFEMPHRT--SPRAPKKPAGGGAAVSRVAELEAKLGKAEGQLAEMR 95

Query: 491 ANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLE 670
              +  ++A +  R +   +K+  S  +++ A   A  S+ AA +   +  +  +  ++ 
Sbjct: 96  EQLAAAEKARKDARAALVESKKRFSAAKKRVATAGAASSSAAAEQTPPQAVSDEKCGVIS 155

Query: 671 DVGICCEKA 697
             G   E A
Sbjct: 156 PAGDVPEAA 164


>01_05_0487 +
           22641133-22642182,22642276-22642863,22642961-22643068,
           22643582-22643692,22643784-22643849,22644858-22644917,
           22644990-22645119,22645159-22645547,22645783-22645902,
           22645957-22646022,22646190-22646255
          Length = 917

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 22/91 (24%), Positives = 37/91 (40%)
 Frame = +2

Query: 311 DEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRL 490
           D   T+N V       EM+  S    + +R+++    +  TS+   A   K   +    L
Sbjct: 118 DVAATVNDVGAEVKDDEMEAESAAPKRRKRKKEKEKERKTTSKVAEADAKKPPRHVRVML 177

Query: 491 ANESPEQRATRLKRMSEYAAKRLSSETREQR 583
              +  + A  L++  E   KR + E R QR
Sbjct: 178 EVLAKRKEAEELRKREEELRKRKAEEERLQR 208


>12_01_0552 +
           4469009-4469080,4470052-4470117,4470808-4470941,
           4471073-4471179,4471695-4471802,4471879-4471949,
           4472126-4472185,4472264-4472319,4472663-4472723,
           4472809-4473076,4473174-4473355,4473444-4473736,
           4474048-4474138
          Length = 522

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 630 ASRRAAYADILANLIALCSLVSDESLLAAYSDIRFSLVARCSGDSFAS 487
           ++ R   A IL      CSL+ D S+L  YSD   + +A  S D   S
Sbjct: 343 STSRRKLASILHESGKKCSLIDDASVLERYSDASCNSIAVFSDDDALS 390


>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
            29254991-29255130,29255262-29255571,29255810-29255952,
            29256106-29256306,29256453-29256581,29256921-29257199,
            29258036-29259720,29261255-29261764,29261901-29262108,
            29264347-29264458,29264594-29264763
          Length = 1439

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 357  KKWIHYHCWSLKRVDEGKAQDQRVKHQKREPHG*PRCLHMQH 482
            ++W+   C S    D     +QR++ ++R P    +CLH+ H
Sbjct: 1281 RRWVCNECKSFYICDRCYNAEQRLEEKERHPSN-SKCLHILH 1321


>06_03_0234 + 18555036-18555264,18559110-18559234,18559506-18559925
          Length = 257

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +2

Query: 407 KGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRA 586
           KG GP  E     A     MSA     L     EQR++  + ++EY  +   S    +R 
Sbjct: 134 KGKGPMVEAIRAPAYTFPNMSAIIWPHLGGLPNEQRSSLQESIAEYDRQAKESAVEIERH 193

Query: 587 IRL 595
            R+
Sbjct: 194 FRI 196


>03_06_0316 + 33091194-33091370,33091451-33092155
          Length = 293

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
 Frame = +2

Query: 368 PLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYA 547
           P +  +PKA  + K   P    +  +    AK +A        +SP + A + K   +  
Sbjct: 146 PKAAAKPKAAAKPKAKAPAKSKAAAKPKAAAKPAAKPKAAAKPKSPAKPAAKPKAAPKAK 205

Query: 548 AK-------------RLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLEDVGICC 688
           AK             + ++ T+ +     AR  A AA+  A +TP+++ A   +      
Sbjct: 206 AKPAAKPKAKAAPKPKAAAVTKTKATSAPARRPAKAAKTSAKDTPSKKAAPAAKKPAAAA 265

Query: 689 EKA 697
           +KA
Sbjct: 266 KKA 268


>01_06_1171 -
           35089719-35090336,35090596-35090715,35090851-35091108,
           35091934-35092563
          Length = 541

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 537 PNM-QLKDFHQRRENRERLGWQECLHMQPVDLLMRPQHKGKLDYW 668
           PN+ +L  FH R E+ ER+   E LH   +D L+  +  G+   W
Sbjct: 228 PNLCKLIGFHAREESNERMLVYERLHHGSLDKLLFGRSDGRFMDW 272


>01_01_0051 + 389051-389623
          Length = 190

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 618 AAYADILANLI-ALCSLVSDESLLAAYSDIRFSLVARCSGDSFASLCAAYADILASRAAL 442
           A + D LA +  ALC++ +D +  A   D    +   C+  + A +   YADI    A L
Sbjct: 2   ATFRDHLAVIAEALCAIAADMNAAARALDPSTVISLACAAFTVAIVLVCYADICGRLATL 61

Query: 441 SS 436
            S
Sbjct: 62  HS 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,750,577
Number of Sequences: 37544
Number of extensions: 381436
Number of successful extensions: 1156
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -