Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0410
(832 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_22393| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 33 0.38
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 33 0.38
SB_33094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 32 0.66
SB_53353| Best HMM Match : Vicilin_N (HMM E-Value=8.3) 32 0.66
SB_21013| Best HMM Match : FeS (HMM E-Value=9) 31 0.87
SB_51133| Best HMM Match : Pox_A32 (HMM E-Value=0.028) 31 1.1
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 31 1.1
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 31 1.5
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 29 3.5
SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56) 29 4.6
SB_58035| Best HMM Match : Casein (HMM E-Value=1.9) 29 4.6
SB_19921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 29 6.1
SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_57136| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 29 6.1
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 28 8.1
SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38) 28 8.1
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 329 NTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPE 508
+T EPV E+D +P ++++ + G + ++ +R E E
Sbjct: 601 DTTEPVVSDTELDSAVKGKPASKKKTRPHGSADSVPVKTPSKTKAQKKAEKERAEKEHEE 660
Query: 509 QRATRLKRMSEYAA-KRLSSETREQRAIRLARMSAYAARRLANETPAQRQA 658
T+++ +SE ++ K +SET++ R+ A + + +T A + A
Sbjct: 661 HMLTKVRGLSELSSTKSPNSETKKPRSTSAANTTTAPTQTRQKKTSAGKPA 711
>SB_22393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 455 LAKMSAYAAQRLANESPEQR-ATRLKRM-SEYAAKRLSSETREQRAIRLARMSAYAARRL 628
L + AY+A+RL E+ +R A +R+ E +R + R L R AY+ARRL
Sbjct: 45 LIRRDAYSARRLFGETLIRRDAYSARRLYGETLIRRDAYSARRSFGETLIRRDAYSARRL 104
Query: 629 ANETPAQRQA 658
ET +R A
Sbjct: 105 FGETLIRRDA 114
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 32.7 bits (71), Expect = 0.38
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +2
Query: 383 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESP--EQRATRLKRMSEYAAKR 556
E + RR R+ + EER +L + + AAQR E E+ +R + A+
Sbjct: 180 EEEERRIREEEERQKALKEERMRKLQEEARLAAQRALEEKRKLEEERKEQERKEKELAEL 239
Query: 557 LSSETREQRAIRLARMSAYAARRLANETPAQRQARLLED 673
E+R R + A+R A E A R+ +E+
Sbjct: 240 EKKRQEERRRQEEKRRAEEEAKRKAEEEKAAREKAEMEE 278
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 32.7 bits (71), Expect = 0.38
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Frame = +2
Query: 317 QETLNTVEPVDMIQEM-DPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLA 493
Q +L T +QE+ P + AR R + +T RA + + ++ A
Sbjct: 43 QSSLKTKTSKPQVQEIRKPQDQDKQAARPRDTQAARPKDTQPARAGQATRKPQDQNKQAA 102
Query: 494 NESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLED 673
P Q++ ++KR + KR +S R+ + +A+R+ ++ R L+D
Sbjct: 103 RPRPRQKSRKIKRQASRKTKRQAS--RKTNTSKRQDHYKHASRKTKTSQSQDQETRKLQD 160
>SB_33094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 383 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 562
E +ARR+++ + +ERA RLA++ Y AQR +++ + A RLK + A ++
Sbjct: 16 EEEARRQKR----EELFEKERAERLARLGDYKAQRKLDKAKREEA-RLKEEMQKAKEKEK 70
Query: 563 SETR 574
+E R
Sbjct: 71 AERR 74
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 31.9 bits (69), Expect = 0.66
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Frame = +2
Query: 314 EQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLA 493
E+E E + ++E D LE + R + + + E ++ K++ ++L
Sbjct: 1232 EEERRLEEERLRQLEEEDEQRRLEEEQIREAEEELRRLQEEREYREQMRKIAEARERKLQ 1291
Query: 494 NESPEQRATRLK--RMSEYAAKRLSSE-----TREQRAIRLARMSAYAARRLANETPAQR 652
E E+R + R E +RL E EQ+ + +AR AR A + A+R
Sbjct: 1292 EEEEERRRQEEEQLRAIEEERRRLQEEEERKLREEQKRVEMARRLEVVARMRAAQEAARR 1351
Query: 653 QARLL 667
+ LL
Sbjct: 1352 KTTLL 1356
>SB_53353| Best HMM Match : Vicilin_N (HMM E-Value=8.3)
Length = 171
Score = 31.9 bits (69), Expect = 0.66
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 338 EPVDMIQEMDPLSLLEP---KARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPE 508
+P +++ +DP SLL P ++ R+R E EER L + S Y Q+ ++
Sbjct: 48 KPSEIVPPIDPDSLLNPAYLESNRQRAKVKLSEEEEEERILLLKEWSRYKMQQ--HKEDL 105
Query: 509 QRATRLKRMSEYAAKRL--SSETREQRAIR 592
QR R E A K L +SE + AI+
Sbjct: 106 QRLQEQARCREEALKELKKTSEFLYKEAIK 135
>SB_21013| Best HMM Match : FeS (HMM E-Value=9)
Length = 123
Score = 31.5 bits (68), Expect = 0.87
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +2
Query: 455 LAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLAN 634
L + AY+A+RL E L R Y+A+RL ET L R AY+ RRL
Sbjct: 25 LIRRDAYSARRLFGEM-------LIRRDAYSARRLFGET-------LIRRDAYSGRRLFG 70
Query: 635 ETPAQRQA 658
ET +R A
Sbjct: 71 ETLIRRDA 78
>SB_51133| Best HMM Match : Pox_A32 (HMM E-Value=0.028)
Length = 1736
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 561 HQRRENRERLGWQECLHMQPV--DLLMRPQHKGKLDYWRMSAYAAKRQASK 707
H R R RLGW + LH+ P+ D P ++Y +M+A A A K
Sbjct: 1676 HNRPRRRHRLGWAQGLHLAPLRADFTKDPS-ANAMNYAKMTAAVAGAVALK 1725
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +2
Query: 407 KGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRA 586
K + PK ++S+++ R + A++ ++ R T + S +A R E R RA
Sbjct: 1807 KKTKPKQDSSKKKRKRSPSPATSASREGTRKAKRPRLTDSAKSSR-SALRNCWEGRSVRA 1865
Query: 587 IRLARMSAY---AARRLANETPAQRQARLLEDVGICCEKA 697
L R A AARRL+ TP Q+R + +KA
Sbjct: 1866 SSLLRQLAKGGCAARRLSWVTPGFSQSRRCKTTAKALKKA 1905
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 143 LSQADSSWKKMVIAKTNNEWKSSVGEDANAASNTTHFRLSDE 268
+++A S W+K A+ N EW S+ ++ A T H L DE
Sbjct: 1590 VAEARSQWEKE--AEINKEWASTQEQEVTRALETAHSELVDE 1629
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -2
Query: 675 TSSNSLACLCAGVSLASRRAAYADILANLIA--LCSLVSDESL 553
+SS SL C +L SR Y+D++A LIA + L+ D SL
Sbjct: 782 SSSTSLLCWLVVSTLESRGLLYSDVIAGLIAGVIAGLLVDPSL 824
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +2
Query: 383 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 562
E K +++ KS + +ER + K+ + E +++ R+KR + +++
Sbjct: 117 EKKKKKKTSKKRKKSSSKDERKRKSKKIRTVQSSDSETELNQEKRKRIKRTKDKTSRK-- 174
Query: 563 SETREQRAIRLARMSAYAARR 625
S+T +++ R + S A RR
Sbjct: 175 SKTEKRKKERTVKDSDTAQRR 195
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/109 (24%), Positives = 42/109 (38%)
Frame = +2
Query: 254 RLSDECIQYDNXXXXXXXXDEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSET 433
RLS E +Q E LN P+D + DP S K + +G E
Sbjct: 128 RLSTEALQISELPGYSLPVGEPVPLNNSLPIDSLFPEDP-SWRRAKEIWEKNETGETKEE 186
Query: 434 SEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQ 580
++R K + +R + +++ R + E KR SE RE+
Sbjct: 187 RKKRHKDKKKKREESKERRRHSDKAEKSERKREKEE--KKRDKSEKRER 233
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/89 (21%), Positives = 36/89 (40%)
Frame = +2
Query: 389 KARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSE 568
+ ++ K K + +++AAR A Q P Q + + K AA++ S +
Sbjct: 184 RKKKTSKNKPSKMQDQDKQAARQASRKTSKPQDKQAARPRQASRKTKTSKPQAARQASRK 243
Query: 569 TREQRAIRLARMSAYAARRLANETPAQRQ 655
++++A R + S E Q Q
Sbjct: 244 PQDKQAARPRQASRKTKTNKPQEKDKQEQ 272
>SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56)
Length = 1566
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = -3
Query: 530 ASV*WRAVPVTHLPASVLHMQTSWLAVRLSLLMFHSLVLSLSFVYAL*APTMIVDP 363
ASV VTHLPASV H+ +S + S++ F S+SF + PT ++ P
Sbjct: 1397 ASVTHLPASVTHLPASVTHLPSSATHLPASVMPF-----SISFTH---PPTPVMQP 1444
>SB_58035| Best HMM Match : Casein (HMM E-Value=1.9)
Length = 450
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 413 SGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAA--KRLSSETREQRA 586
+GP+++ S+ ++ +AY + E EQ+ K + +Y K++S + + QR
Sbjct: 270 NGPENDESKTLFGKIHGFAAYKPSKQVQEIKEQQVKMTKELHKYEKLYKKISKQHKMQRQ 329
Query: 587 I 589
I
Sbjct: 330 I 330
>SB_19921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 506 EQRATRLKRMSEYAAKRLSSETREQRAIRLARMSA--YAARRLANETPAQR 652
E R+ +LKR EY ++L +E Q A ++A +A A++R +TP ++
Sbjct: 65 ETRSQKLKREREY--RKLKTEIASQNASKIASQNASKIASQRTHRKTPREK 113
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 314 EQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAA 451
EQ ++T E D I D + P ARR R+G G S + A
Sbjct: 749 EQSDMDTSESYDPIAPTDDPGPVTPLARRGRRGRGRGGSASRGKGA 794
>SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 455 LAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETR 574
LA + +Y A + A E E+R T LKR E A+R+ E +
Sbjct: 244 LAVVQSYMAHKTAKE--EERNTLLKRSEELKAERIELEAK 281
>SB_57136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +2
Query: 452 RLAKMSAYAAQRLANESPEQRATRLKR--MSEYAAKRLSSETREQRAIRLARMSAYAARR 625
R + Y+ + L NE QR R ++E + +R TR+ R + Y+ R
Sbjct: 46 RSTQREIYSTRDLLNEGSTQRGIYSTRDLLNEGSTQRGIYSTRDLLNERSTQREIYSTRD 105
Query: 626 LANETPAQRQARLLEDV 676
L NE QR+ D+
Sbjct: 106 LLNEGSTQREIYSTRDL 122
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +2
Query: 452 RLAKMSAYAAQRLANESPEQRATRLKR--MSEYAAKRLSSETREQRAIRLARMSAYAARR 625
R + Y+ + L NE QR R ++E +R TR+ R + Y+ R
Sbjct: 94 RSTQREIYSTRDLLNEGSTQREIYSTRDLLNERCTQREMYSTRDILNERYTQREIYSTRD 153
Query: 626 LANETPAQRQARLLEDV 676
+ NE QR+ D+
Sbjct: 154 ILNEGYTQREIYSTRDI 170
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +2
Query: 356 QEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRM 535
+ + ++ LE + + +R + + ++ ARL K+ Q+L N + + ++
Sbjct: 49 RNQEDIAKLEQQLKEQRTLNEKAMKDTDLLNARLTKVQQDFEQQLMN-CDQLASENTQKA 107
Query: 536 SEYAAKRLSSETREQRAIRLARMSAYAARRL 628
+E AK T +Q +RL +M RRL
Sbjct: 108 AELKAKEDEINTLKQDTVRLTKMREAIQRRL 138
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 419 PKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQR 583
P+ E E+ L A + + A E E + K+MS A+KR ++TRE +
Sbjct: 802 PEQEDPPEKLEHL--QDALESMQYAGEHLEMAEGKRKKMSTQASKREGAQTREPK 854
>SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38)
Length = 184
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/83 (25%), Positives = 42/83 (50%)
Frame = +2
Query: 404 RKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQR 583
+K K +++ AA+ AK +A + A +SP++ A + AAK + ++
Sbjct: 105 KKPKAAKKPAAKKPAAKKAKSPKKSAPKKATKSPKKTAKKPAAKKPAAAKPKKAAAKKPA 164
Query: 584 AIRLARMSAYAARRLANETPAQR 652
A + A+ AA++ A + PA++
Sbjct: 165 AKKAAKKP--AAKKAAKK-PAKK 184
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/88 (23%), Positives = 39/88 (44%)
Frame = +2
Query: 329 NTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPE 508
N VE V + E+ L + KG+ +S+ +E+R L + A A N+
Sbjct: 670 NQVEKV--VNELKSLKKKHEELENSSKGAERRSKEAEKRIENLEQECASA-----NDMAM 722
Query: 509 QRATRLKRMSEYAAKRLSSETREQRAIR 592
+++ L R+ K++ T+E +R
Sbjct: 723 EKSVELSRLKRTIEKKIDKLTKENSELR 750
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,584,633
Number of Sequences: 59808
Number of extensions: 456982
Number of successful extensions: 1022
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -