Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0408
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4) 38 0.008
SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_28768| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 37 0.011
SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_34064| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_28521| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 31 0.56
SB_34332| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 29 2.2
SB_40803| Best HMM Match : SRCR (HMM E-Value=0.00013) 29 2.2
SB_5204| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.014) 29 3.9
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 28 5.2
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 28 5.2
SB_36057| Best HMM Match : DUF626 (HMM E-Value=2) 28 6.9
SB_21326| Best HMM Match : Myosin_head (HMM E-Value=5e-05) 28 6.9
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_55408| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.4) 28 6.9
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_21087| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.4) 28 6.9
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15) 27 9.1
SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++L +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSLDHSKTRTHVRLLGPCFKTG 45
>SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4)
Length = 402
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F + ++ +S TRTH RLLGPC+KTG
Sbjct: 247 AFTFISPRSFDHSKTRTHVRLLGPCFKTG 275
>SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_28768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 141 AFTFITPRSFGHSKTRTHVRLLGPCFKTG 169
>SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 260 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 288
>SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 557 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 474
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 527 NSMTRTHARLLGPCYKTG 474
+S TRTH RLLGPC+KTG
Sbjct: 28 HSKTRTHVRLLGPCFKTG 45
>SB_34064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 527 NSMTRTHARLLGPCYKT 477
+S TRTH RLLGPC+KT
Sbjct: 352 HSETRTHVRLLGPCFKT 368
>SB_28521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 463 ALAGPVL*HGPRSLACVRVIE 525
A + P L HGPRSL CVRV E
Sbjct: 61 ASSDPCLKHGPRSLTCVRVFE 81
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = -2
Query: 202 RTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRT----VPTENERTKRTFRQHLNARKR 35
R+ SR+ LN +R+ R R + ++SRD KRSR+ P ER K +H +R +
Sbjct: 237 RSRSRSATLNQKRS-RSKHSRSR-SNSRDQKRSRSRRSHTPPSEERPKSRLYRH--SRSK 292
Query: 34 TPERKR*ISP 5
+ ERK SP
Sbjct: 293 SKERKTLKSP 302
>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
Length = 686
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 451 SSQTFKQTRTSPRLHGCDNRRVALASALRQETRKYDVDLRR 329
+S + T+ SP + R LA LRQ T Y+ +LRR
Sbjct: 474 TSPQYTLTKVSPEMEALVRERNDLARELRQRTEAYEAELRR 514
>SB_34332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 474 TRLVTRTKESSMCAS 518
TRL TRTKES+MCAS
Sbjct: 35 TRLETRTKESNMCAS 49
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -2
Query: 214 TNKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKR 35
+ K R SR+ L+ RR + K S RD RSR + ++ R +++ +R R
Sbjct: 272 SRKHRHRSRSSSLSSRRRSK-----HKRKSKRDRSRSRDRSSSKSKSLRRSKKYSRSRSR 326
Query: 34 TPERKR 17
+ ER+R
Sbjct: 327 SSERRR 332
>SB_40803| Best HMM Match : SRCR (HMM E-Value=0.00013)
Length = 269
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = -2
Query: 241 TIRGPNVF*TNKTRTVSRAI------VLNPRRTG-RDALLREKCTSSRDVKRSRTVPTEN 83
T R PNV NKTRT + V PR R KCT+++ K + T P
Sbjct: 19 TPRHPNVRTRNKTRTRTYTHPDAPIHVHAPRHANVRTRTQTRKCTNTQTRKCTYTHPDIQ 78
Query: 82 ERTKRTFRQHLNARKRTPERK 20
+ +H NAR+RT RK
Sbjct: 79 KHVHAP--RHANARRRTKTRK 97
>SB_5204| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.014)
Length = 351
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 142 REKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPER 23
R +C +R +KR R + T + T + FR+ L+ ++ ER
Sbjct: 11 RLRCKITRAIKRIRNLTTTDTTTAKRFRKELDQLRKDFER 50
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 109 RSRTVPTENERTKRTFRQHLNARKRTPERKR 17
+SRT P R++ ++H ++ RTP R R
Sbjct: 67 KSRTPPRHRRRSRSPNKKHSRSKSRTPPRHR 97
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 593 ERTSSVRLHFRYAFQFNVKNL*NSMTRTHARLLGPCYK 480
+R+S +RLH R +KN +++TR +LL P +K
Sbjct: 235 QRSSDLRLHSRKQPDIPIKNQLSNITRLLEQLLNPDHK 272
>SB_36057| Best HMM Match : DUF626 (HMM E-Value=2)
Length = 401
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 321 RPARRKSTSYFLVSCLSADASATRLLS--QPCSLGLVRVCLNVCDDTVSGTRRTRLVTRT 494
RP S + S +S AS + +L +P +L V V ++V DT RR + RT
Sbjct: 25 RPLAGASRDWVTSSGVSNSASLSCVLDDLEPDTLYEVEVTVSVRGDT----RRDTVYIRT 80
Query: 495 KESSMCASH 521
+S C SH
Sbjct: 81 TQSGRCTSH 89
>SB_21326| Best HMM Match : Myosin_head (HMM E-Value=5e-05)
Length = 469
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 417 GLVRVCLNVCDDTVSGTRRTRLVTRTKE 500
GL ++C+N+C +T+ TR+ T+E
Sbjct: 121 GLNQICVNLCAETIQHFYNTRIFKTTEE 148
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = -2
Query: 145 LREKCTSSRDVK---RSRTVPTENERTKRT 65
+R K T S+ VK RSR +PTE E+T R+
Sbjct: 421 IRAKETGSQKVKSKIRSRDLPTEKEKTSRS 450
>SB_55408| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.4)
Length = 118
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 169 RRTGRDALLREKCTSSRDVKRSRTVPTENERT 74
R D +LREK S D+ RT+P N +
Sbjct: 34 RERNSDVILREKRRGSEDLMTGRTIPFANRNS 65
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -2
Query: 169 RRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 17
R+ R R K R KR R +R +R RQ RKR +RKR
Sbjct: 1040 RKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKR 1090
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -2
Query: 169 RRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 17
R+ R R K R KR R +R +R RQ RKR +RKR
Sbjct: 1082 RKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKR 1132
>SB_21087| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.4)
Length = 118
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 169 RRTGRDALLREKCTSSRDVKRSRTVPTENERT 74
R D +LREK S D+ RT+P N +
Sbjct: 34 RERNSDVILREKRRGSEDLMTGRTIPFANRNS 65
>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
Length = 884
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 184 IVLNPRRTGRDAL--LREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRT 32
+ L P T D L L EK TS RD RSR +E H+ R+R+
Sbjct: 198 VPLEPSPTVLDGLDKLMEKNTSDRDDDRSRPHDPISEHLLYLMMHHMQRRRRS 250
>SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 166 RTGRDALLREKCTSSRDVKRSRTVPTENERTK-RTFRQHLNARKRT 32
R GR LR CTS+ + SRT+P ENE T+ +R R+RT
Sbjct: 531 RGGRGGRLR--CTSTTPL--SRTLPVENEATQLEDWRPFGGPRQRT 572
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,768,189
Number of Sequences: 59808
Number of extensions: 372992
Number of successful extensions: 1227
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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