Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0408
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 30 1.1
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 30 1.1
AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical ... 30 1.5
AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical ... 30 1.5
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 3.5
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 27 8.0
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 27 8.0
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 27 8.0
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 27 8.0
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 169 RRTGRDALL-REKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR*ISP 5
RR +D+ R + R RSR+V +N + ++ N R+R+P R R SP
Sbjct: 1118 RRPNKDSYRDRRRFNGRRSRSRSRSVSPQNYKRRKLDEHDNNHRQRSPIRDRHTSP 1173
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 169 RRTGRDALL-REKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR*ISP 5
RR +D+ R + R RSR+V +N + ++ N R+R+P R R SP
Sbjct: 1132 RRPNKDSYRDRRRFNGRRSRSRSRSVSPQNYKRRKLDEHDNNHRQRSPIRDRHTSP 1187
>AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical
protein H17B01.4b protein.
Length = 395
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 239 DTRSERVLNE*N---SYGLPRDRLKSTTNGSRCITKREVHVFSGR*TFTYRADGERTHET 69
D RS RV N+ N ++ LP KS +T + +HV SGR +R E+ ET
Sbjct: 101 DGRSVRVWNKNNGVLAHQLPISEQKSEIQAIH-VTNQRLHVASGRTLVVFRLGDEKPVET 159
Query: 68 NVPST 54
+ T
Sbjct: 160 VISKT 164
>AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical
protein H17B01.4a protein.
Length = 946
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 239 DTRSERVLNE*N---SYGLPRDRLKSTTNGSRCITKREVHVFSGR*TFTYRADGERTHET 69
D RS RV N+ N ++ LP KS +T + +HV SGR +R E+ ET
Sbjct: 101 DGRSVRVWNKNNGVLAHQLPISEQKSEIQAIH-VTNQRLHVASGRTLVVFRLGDEKPVET 159
Query: 68 NVPST 54
+ T
Sbjct: 160 VISKT 164
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -2
Query: 229 PNVF*TNKTRTVSRAIVLNPRRTG-RDALLREKCTSSRDVKRSRTVPTENERTKRTFRQH 53
P+ T+KT T R V P T R + KCT ++V + +PT T +F H
Sbjct: 293 PDANETSKTPTAIR--VRRPSPTNLRSVSFQNKCTVLKNVPMPQVLPT----TSSSFDHH 346
Query: 52 LNARKRTPER 23
TP+R
Sbjct: 347 PQYHSNTPDR 356
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -2
Query: 193 SRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 17
SR PR R ++ R+ R+ +R R E+ R +R + R+R+PER+R
Sbjct: 260 SRKDQRKPREDRRRSVERQ---DQREDRRDRRRSPEDPRERRRSPEDRTVRRRSPERRR 315
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -2
Query: 211 NKTRTVSRAIVLNPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRT 32
+ +R+ SR+ + RR+ + R K S KRSR R++ R N + R+
Sbjct: 210 SNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKSRS 269
Query: 31 PER 23
P R
Sbjct: 270 PSR 272
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 FRTRSDRVSFRSTHSDGIIKLITH-ALKIPKKNFLIRVRPDA 336
FRT + V S H+DG+I L+ + A K K L + P+A
Sbjct: 244 FRTLGELVHHHSVHADGLICLLMYPASKKDKGRGLFSLSPNA 285
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 FRTRSDRVSFRSTHSDGIIKLITH-ALKIPKKNFLIRVRPDA 336
FRT + V S H+DG+I L+ + A K K L + P+A
Sbjct: 249 FRTLGELVHHHSVHADGLICLLMYPASKKDKGRGLFSLSPNA 290
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 FRTRSDRVSFRSTHSDGIIKLITH-ALKIPKKNFLIRVRPDA 336
FRT + V S H+DG+I L+ + A K K L + P+A
Sbjct: 259 FRTLGELVHHHSVHADGLICLLMYPASKKDKGRGLFSLSPNA 300
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 FRTRSDRVSFRSTHSDGIIKLITH-ALKIPKKNFLIRVRPDA 336
FRT + V S H+DG+I L+ + A K K L + P+A
Sbjct: 110 FRTLGELVHHHSVHADGLICLLMYPASKKDKGRGLFSLSPNA 151
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 169 RRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 17
R+ G+ + R + S RD +R R ER + R + R+R ER+R
Sbjct: 154 RKRGKRSRSRSRERSYRDDRRDRKRSRSRERRRSPPRGTTSDRRRDDERRR 204
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 169 RRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 17
R+ G+ + R + S RD +R R ER + R + R+R ER+R
Sbjct: 280 RKRGKRSRSRSRERSYRDDRRDRKRSRSRERRRSPPRGTTSDRRRDDERRR 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,785,528
Number of Sequences: 27780
Number of extensions: 252707
Number of successful extensions: 783
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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