Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0406
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.3  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
 Frame = -2

Query: 260 REPLYGVSWNGHFARPDL-QARKL----RRQFVSESVFFHPGIFPL 138
           + PL  VS+   F    L  A  L    R    +   FFHPG+ PL
Sbjct: 19  KTPLSSVSYPSMFTPSQLLMASHLMAASRLSLPTNPAFFHPGLLPL 64


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 162 FPPWHFPAQNGPSPSNS 112
           F PW    Q  PSPS++
Sbjct: 64  FHPWKKSPQGAPSPSST 80


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 195 AAPAVRLRECIFPPWH 148
           A PAV LR+ +F  WH
Sbjct: 388 ADPAVDLRDPLFFRWH 403


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 670 CVRKRNVWPKPWEP 711
           CVRKR   P+P+ P
Sbjct: 18  CVRKRPHSPEPYPP 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,567
Number of Sequences: 336
Number of extensions: 3765
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)