Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0406
         (774 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF462650-1|AAM92085.1|  110|Homo sapiens immunoglobulin light ch...    31   4.6  
BC034223-1|AAH34223.1|  876|Homo sapiens chromosome 10 open read...    31   6.1  
AL392043-10|CAI39950.2|  876|Homo sapiens chromosome 10 open rea...    31   6.1  
AF296295-1|AAG47679.1|   79|Homo sapiens immunoglobulin lambda c...    31   6.1  

>AF462650-1|AAM92085.1|  110|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 110

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 375 DDYAAATLSDGFSVAAVDENGDYVGVIINGIVRREEVDYTDKSEDCPNP 521
           DD   + + D FS  +VD + +   + I+G+   +E DY  +S D  NP
Sbjct: 51  DDQRPSGVPDRFS-GSVDSSSNSASLTISGLKTEDEADYYCQSYDSANP 98


>BC034223-1|AAH34223.1|  876|Homo sapiens chromosome 10 open reading
           frame 92 protein.
          Length = 876

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 674 TQHPHQSSAAPRRVCRRYPDLENRVTSLRQFVPDAS 567
           ++ P  S AAP   CRR  DL+ R+   +Q++  AS
Sbjct: 169 SRDPPASRAAPEEHCRRGEDLKRRMVLAQQYLAQAS 204


>AL392043-10|CAI39950.2|  876|Homo sapiens chromosome 10 open
           reading frame 92 protein.
          Length = 876

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 674 TQHPHQSSAAPRRVCRRYPDLENRVTSLRQFVPDAS 567
           ++ P  S AAP   CRR  DL+ R+   +Q++  AS
Sbjct: 169 SRDPPASRAAPEEHCRRGEDLKRRMVLAQQYLAQAS 204


>AF296295-1|AAG47679.1|   79|Homo sapiens immunoglobulin lambda
           chain variable region protein.
          Length = 79

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 375 DDYAAATLSDGFSVAAVDENGDYVGVIINGIVRREEVDYTDKSEDCPNP 521
           D+   + + D FS  ++D + +   +II+G+   +E DY  +S D  NP
Sbjct: 30  DNQRPSGVPDRFS-GSIDSSSNSASLIISGLKTEDEADYYCQSYDSSNP 77


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,013,157
Number of Sequences: 237096
Number of extensions: 2501082
Number of successful extensions: 6387
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6387
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)