Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0406
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AF025456-1|AAB70959.3|  438|Caenorhabditis elegans Hypothetical ...    28   8.5  

>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +3

Query: 411 SVAAVDENGDYVG--VIINGIVRREEVDYTDKSEDCPNPKFR 530
           S A +DE G + G  VI+ G  RRE V     +++CPN K +
Sbjct: 48  SQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPNDKIK 89


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +3

Query: 411 SVAAVDENGDYVG--VIINGIVRREEVDYTDKSEDCPNPKFR 530
           S A +DE G + G  VI+ G  RRE V     +++CPN K +
Sbjct: 48  SQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPNDKIK 89


>Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical
           protein R05H10.7 protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
 Frame = +3

Query: 315 EPMNLAVNLLETPESRCTELDDYAAATLSDGFSVAAVDENGDYVGVIINGIVRREE--VD 488
           EP   A+ L+++      E     A  L   FS     ++G+ V  ++N   +R++  V+
Sbjct: 30  EPCTRALKLIKSEAEVLYE--SLVARCLQFPFSTVVTTQSGEIVACLVNSAWKRDDNAVE 87

Query: 489 YTD-KSEDCPNPKFRRILKVLGHLDREARIWDKLPETCDSVLEIRIASTHSSWRGRGL 659
             D + ++         +K+L     +   W+  P+  + VL   ++S    ++ RG+
Sbjct: 88  GADYEVDEGLTENMTAFIKMLNTCHED--FWNLAPQNINVVLHREVSSVSEKYQRRGI 143


>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 411 SVAAVDENGDYVG--VIINGIVRREEVDYTDKSEDCPNPKFR 530
           S A +DE G + G  VI+ G  R+E V      E CPN K R
Sbjct: 48  SQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPNEKVR 89


>Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical
           protein F21D9.1 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 612 EIRIASTHSSWRGRGLMRVLCEETERLAKAMGAGALRMD 728
           EI     HS W G    R+ C+  ER+   +G   +R D
Sbjct: 306 EILRGVEHSKWDGERRARIFCDGIERINCGIGDDIVRND 344


>AF025456-1|AAB70959.3|  438|Caenorhabditis elegans Hypothetical
           protein C46F9.4 protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 148 FSRSKWPFSFKFTMPLVLVT 89
           F + KW F  KFTM LV V+
Sbjct: 59  FEKKKWSFQTKFTMKLVAVS 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,724,536
Number of Sequences: 27780
Number of extensions: 382456
Number of successful extensions: 1073
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)